Anopheles marshallii: 128715491
Help
Entry
128715491 CDS
T10928
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
amrs Anopheles marshallii
Pathway
amrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128715491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128715491
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128715491
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128715491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
BEN
Motif
Other DBs
NCBI-GeneID:
128715491
NCBI-ProteinID:
XP_053666372
LinkDB
All DBs
Position
3:complement(35226807..35234173)
Genome browser
AA seq
2219 aa
AA seq
DB search
MKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGREITPQDVAKIVSSMCLTHETLSESNIN
LPTPSAFWPQGNDPSGQKGKDGNGGSSASENTTWKPEVLVQALKEVVPNLNWKEVCLALD
HPEFMLKDRAGLSLLLSIVKMGMQSSNMGQTFPVECLYQRWTNVEGQLSIISQILKNQDL
YSFADHIYTSVSLELLKTPPETDKEVASWISLHLVDVLLYIADHANLSEKVMKIFKVPGA
HCPDILFLALLQINPPMTTARQELFTNLLPIFLGNHPNSGTILHHAWNHSTFNVTLRPII
LHGMADWYMVGEGDQSRLSRILDVAQDLKALSSLLNIRSYMFIIDLACLASRREYLKLEK
WLADKIREHGEPFVKTILKFLQRRCPHIMGGKYNEEQIPKSAQLPPETLSTILNCLQTCI
GNCTPEVAEMIHNMTQYGMLLNSKTRVQQQQQQQQQQAPQQQPPPPGVLRSHRGLEAFGP
NAMSSQLLPPTMVESLNSLTANIGGLSIGGPGGGNSAFSFNNIITTPASPSRLLPSSSPF
PMMPLPPGAAAAAAAQAGPLGRLQQTPNDKLGAGGGAGIPNTAITQSPFQAEAATQPVSK
EVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHENDVFQCMLRNLFEEYKFF
PQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKQEGSKMYYFGITALDRF
KNKLHLYPKYCEYVRSIPHFSEFPPHLIDYIDYGVQGLEPPNKTLGPGPLPPPILQFIPS
GATGRGPVGNPLYRSNSVTGTSNLTLAGVSTSASAAAAAATAASSAGSSSGTPGKLNLTA
QLVAPGGSGGGGGGVASSSGSGAGNSTGGGQPPRVKSIANATNIDTLLVATQDREEQIIT
PPDAIQDKTAFIFNNLSQINLQQKCEEIKEILQKDYYSWLAQYLVMKRASIEVNFHVLYS
NFLDALKIPEVNKLVTNETFRNIRVLLQSDKGIANFSDRSLLKNLGHWLGMMTLGRNKPI
LHLDIDVKSLLVEAYNKGQQELLYVVPFVAKVLESCAKSKVFKPPNPWTMSIMNILAELH
QEPELKLNLKFEIEVLCKNLNIDVSDLKPAIYLKDPERAQNIEYQLSQPKPKEAPAVMPG
AGVAGIGVGGGGGAGSGVVAVVSQLPPGPDEMGSSGPSSSPANVAMDPALAATGPPEPRF
HYSDINIANPSCITQHILYHPTITILHTQSHLKVIVKNSLERTITEWISLIVDRSVKIAS
KTTEQIIRKDFALDSDETRMRRAAHNMARSLVAGMAMITCRDQMLQSIQNNIKTGFLTAL
SHAQKDSIEGAATQLAVDNIELVSAFIQKTAIEKVAIEMEKILAEDFQLRKIARQEGRRY
WDASVLSYQTERMPERIRLNVGGISPSQLAVYEEFSRNIPGFLPITERDVAQFAPKISEL
LPFVATPDEIGAMYDELASKMDAFIKATRIIPILQLHTNNMEQLLEYLIHAHRSLDNLTG
CTLLNKAVEGLLEGLVNIPDQLEHIKLYRDIHLRVMRLMQDNRLFGPLWTNKAITRYMLE
CREELRYNVEAVDLLISSNFVNMQQFDIMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHN
SSITENELASTIEMLHRLTAHPRAPEGLTHLIEMLRANHDPNSFLMDRAVVGPTSFIHAG
LAQARSDIDDSPGFLERAEFLLKDWVTIALSPNSCRDPLKGFSVFVGKMNAHGFLKGDEP
LIRFFRFATQYCIDLTYRNMNEPNSKAKIFQFIDAYVRLIALLVKHSGEGVNTNTKLNLL
NKILGIVVGILLHDQDVHATTFQQMGYQRIFAMLFLELTTQDPILENISISVITAFCHTY
HILRPSAAPGFCYSWLELIAHRVFIGRVLALIPQQKGWHMYSQLLIDLFKYLAPFLRNAE
LAKPVQHLYKGTLRVLLVLLHDFPEFLCDYHFAFCDVIPSNCIQMRNLILSPYPRNMRLP
DPFTPNLKVDMLNDIGGSPRISINYVSSIQPASFKKDLDSYLKARAPVTFLSELRSNLQI
SNEVGSRYNIPLMNALVLYVGTQAIAHIRSKNLGPTMSTIIHSAHMDIFQNLAVDLDTEG
RYLFLNAIANQLRYPNSHTHYFSCCILYLFAEANSEAIQEQITRVLLERLIVNRPHPWGL
LITFIELIKNPIYKFWDHDFVHCAPEIERLFESVAKSCMVTSKSQQQIQNVEPDITECN
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtcctggacgaatctggttgtggaagttggttactccttcacggctaccctt
gacgattgccggaaccatctgctgaaggttggaggacgcgaaataactccccaggatgtg
gcgaagattgtgtcctctatgtgcttaacgcatgaaaccctttcggagagtaacataaac
ttgcctacgccgagtgcattctggccgcagggcaatgatccttccggtcaaaaaggcaag
gatggcaatgggggatcgtcagcatcagaaaacaccacctggaaaccggaagtgctggta
caggcactgaaggaagtggttcccaacttgaactggaaggaggtatgtctggcattggac
catccggaatttatgctgaaagaccgcgcgggactgtccttgctgttgtcgatcgtcaag
atgggcatgcagtcaagtaacatgggccagaccttcccggtcgaatgtctataccagcgg
tggaccaacgtcgaaggacaactgtcgatcatttcgcagattttgaaaaatcaagacctt
tactcgtttgccgatcacatctacaccagcgtgtcgttggagctgctgaagacgccaccg
gaaacggacaaagaggtggcatcgtggatttcgctgcacttggttgacgtgctgctgtac
atcgcggatcatgcaaatttgagcgaaaaggtaatgaaaatcttcaaagtccctggagca
cactgtccggatatactgtttttggcgctgctacaaatcaatcctccgatgacgacggca
agacaggaactgttcacaaatttgctgccgatcttcttgggcaatcacccgaactcggga
accatcctgcatcacgcctggaaccattcgacatttaacgtgacgttgcgtccaatcata
ctgcacggaatggccgattggtacatggttggagagggtgatcaatcacgactctctcgc
attctggatgtagcgcaggacttgaaggcattgtcgagtctactgaatattcgctcatat
atgttcatcatcgatctcgcttgtttggcctcgagacgtgaatatctcaagctggagaag
tggttagcggacaaaatccgcgagcatggtgaaccgtttgtgaagacgatacttaaattt
ctgcaacgccgctgtccacacatcatgggcggaaagtacaacgaggaacaaatcccgaag
tcggctcagctgccaccggaaacactgagcactattctgaactgtttgcaaacttgtatc
ggcaattgtacgcctgaggtggcggaaatgatacacaacatgacgcagtacggaatgttg
ctgaactcgaagacacgagtacagcaacagcagcagcagcagcaacagcaagcgccgcag
cagcaaccaccaccgccaggtgtgttacgatcccaccgagggctggaagcgttcggtcct
aacgcaatgagcagccaactgttgccacccaccatggtggaatcattgaacagtcttaca
gcgaacattggtggacttagtatcggtggaccaggtggcggaaacagtgcgttcagcttc
aacaacatcataactacgcccgcatcaccgtcgcgcctgctcccatcgagcagtcctttc
ccgatgatgccacttccgccgggagcggcagctgcagctgctgcacaggccggcccactt
ggcagattgcaacaaacaccgaacgataagctgggtgcaggtggaggtgcgggtattccg
aacactgccatcacccaatcgccgttccaggcggaagcagcaactcagccggtttcgaag
gaggtggaagatgaagcgaacagctatttccagcgaatctacaatttgccaccgcatccg
acattgtcgattgatgaagtgcttgatatgctgcagcgttacaaggattcgccgaatcgg
cacgagaacgacgtcttccagtgcatgctacgcaatctgttcgaggagtacaagttcttc
cctcagtatccggacaaagaactacagacgacggcacagctgtttggtggcatggtagaa
cgaaatcttgtaacgacctatgttgccctcgggcttgctctgcgttgtgttttggatgcg
ctcaagaagcaggaaggttccaagatgtactacttcggcataacggcgctggaccgcttt
aaaaacaaattgcacctctatccgaagtattgcgagtacgtacgttcgatcccacatttc
agcgaatttccaccgcatctgattgattacatcgattacggtgttcagggtctagaacct
ccgaataaaacccttggcccgggaccattgccaccaccaatcttacagttcatcccgagc
ggtgcaactggtcgtggaccggtcggcaatccactgtaccgaagcaattctgtaaccggc
accagcaaccttacgttggcaggtgtttcaacgtctgcttcggccgcagccgctgcggca
acggcggcttccagtgcaggaagcagttcgggtacgcctggaaaactgaatctaaccgcg
cagttagttgcccccggtggaagtggaggaggtggtggaggtgtggccagtagcagtggc
agtggtgctggcaatagtaccggtggtggacaaccgcctcgtgtgaaatcaatcgcaaat
gcaacgaacatagatacacttctggttgcgacacaggatcgtgaagagcagatcatcacg
ccgccggatgctatccaggacaaaacagcgttcatattcaacaacctgagccagatcaat
ctgcagcaaaagtgtgaagagattaaagaaattttgcaaaaagattactactcctggttg
gcacaatatctcgtcatgaaacgcgcctccatcgaagtgaacttccatgtgctgtattcc
aattttctcgatgcgctcaaaattccggaagtcaataagctcgttacgaacgaaacattc
cgtaatatccgagtgctattgcaatcggataagggtatagcgaatttttccgaccgctca
ttgttgaaaaatcttggccactggttgggaatgatgacgctcggtagaaacaagccgatc
ttgcatctggacatcgacgtgaagtcgttgctagtggaagcgtacaacaagggacagcag
gagctgctgtacgtagtaccgtttgtagcgaaggtgttggaatcgtgtgccaagagtaag
gtgttcaaaccgccaaacccgtggacaatgtcgattatgaatatacttgccgaactgcac
caagaaccggaactgaagttgaatctgaagttcgaaatcgaggtactgtgcaagaacctc
aacatcgacgtgagcgatctcaaacccgcgatctaccttaaggacccggaacgtgctcaa
aatattgagtaccaactgtcacagccgaagccgaaagaggcacccgcagtaatgcccggg
gcaggagtcgctggaatcggtgttggaggtggtggtggtgctggcagtggtgttgttgcc
gtagtgtcccaacttccacccggtccggatgaaatgggctcaagtggcccatcgagctct
ccggccaatgtggcgatggatccagcactagcagcaacaggaccaccggaaccgcggttc
cactactcggacatcaacattgcaaatccgagctgcatcacccagcacatcctctatcat
ccgaccattaccattctgcacacacaatctcatctgaaggtgattgtaaagaacagcctg
gagcggacgataactgaatggatatcgttgatcgttgatcgcagtgttaagattgcatcg
aaaacgaccgagcaaattatccgtaaagactttgcgcttgactccgacgagacacgtatg
cgccgtgcagcgcacaatatggctcgtagtctggtggccggcatggcgatgatcacttgc
cgtgatcaaatgttacaaagcatccagaacaacatcaaaacgggcttcctgacagcgctg
tcacacgcacaaaaggatagcatcgagggagccgccacacagctggccgtggacaacatc
gagctggtgtcagccttcatccaaaagaccgctatcgagaaggtggccatcgagatggaa
aaaatcctggcggaagattttcaactgcgcaaaattgctcggcaggaaggccgacgctat
tgggatgctagcgtactatcgtaccagacggaacgaatgccggaacgtattcgactcaat
gtcggcggtatctcgccgagtcagttggctgtgtatgaagagttttcgcgcaacattcct
gggttcttaccgatcacggaacgagatgtggctcagtttgcaccgaagatatcggagttg
cttccatttgttgctacacccgacgaaattggtgccatgtacgatgagctagcgagcaaa
atggatgctttcatcaaggcgacacgcatcattcccatactacagcttcatacgaacaac
atggaacagttgctggaatatttgattcacgcgcaccgttcgttggacaacttaacaggg
tgtacgctgttgaataaagcggtggagggattgctggaaggtttggtgaacataccagac
cagctcgagcacatcaaactttaccgcgatatacatctgcgcgtaatgcgccttatgcaa
gataaccgactgtttggaccgctgtggacgaacaaagccatcacacgatacatgttggaa
tgtcgtgaagagctgcgctataatgtggaggccgtcgatttgctgatttcgtccaacttt
gtcaacatgcagcagttcgacatcatgttggtgcagctgatggacaatggtaacaattac
gtggccgtcgtgttcgcgatgcagctgctgcagacgttcttcatcgacgagcgccacaac
tcgtccatcaccgagaatgagctggcaagcacaatcgaaatgttgcaccgcttgaccgcg
catccgcgtgcaccggaagggttaacacatctgatcgaaatgctccgtgccaaccacgat
ccaaactcgttccttatggatcgcgctgtcgttggaccaacgtccttcattcatgcgggt
ttagcgcaagcaaggtcggacattgacgattcacctggttttcttgaacgggcagaattt
ctgctcaaggattgggttacgattgcattatcaccgaacagctgtcgcgatccgctcaag
ggttttagtgtgtttgttggaaagatgaatgcgcacggctttctaaaaggcgatgaaccg
ctgatacgattcttccgctttgctacacagtactgcatcgacctaacgtatcgcaacatg
aacgaaccgaattcaaaagcgaaaattttccaattcatcgatgcatacgtgcggttgatc
gcgctgctggtaaaacattcgggtgaaggtgtcaacacgaatacgaagctgaatctgttg
aacaagattctgggtattgtcgttggtattctgttgcacgaccaggacgtacacgcaacc
accttccagcagatgggctatcaacgaatttttgctatgcttttccttgagctgaccacg
caagatccaattttggagaatatcagcatcagtgttattaccgcgttctgtcacacatat
cacattttgcgtccatcagctgcaccaggattttgctactcctggctagaactgatcgcg
caccgtgtcttcatcggacgtgttcttgcgctgattcctcagcagaagggttggcacatg
tattcgcagctactgatcgatctgttcaaataccttgcgccattcttgcgcaacgccgag
ctagcgaaaccggtacagcatctgtacaagggaacgttgcgagtgttgctagtgctgttg
cacgattttcccgaatttctgtgcgattatcattttgccttctgcgatgtcattccatcg
aactgcatccagatgcgcaatctgattctctcaccgtatccacgaaatatgcgcttgccg
gatccattcactccgaatctaaaggtggacatgttgaatgatattggcggatcgccgcgt
atttccatcaactacgtttcctccattcagcccgcaagcttcaaaaaagatctcgactcg
tatctgaaagcccgcgccccggtcaccttcctgtcggagttgcgttcgaatttacagatt
tcgaatgaggtgggatcgcgctataatataccgttgatgaacgcgctggtcctgtacgtc
ggcacccaagccattgctcacattcgatcgaaaaatttgggcccaacaatgtccacgatc
atccacagtgcacatatggatattttccagaacttggcagtggatctagacaccgaggga
cgctatttgttcctgaacgcgattgctaaccagctacgctatccgaacagtcacacgcat
tactttagctgttgcattttgtatctgttcgctgaggcaaactcggaagcgatccaggaa
caaatcacccgtgttcttctcgaacgcttgatcgttaatcgtccgcatccttggggatta
ctgatcaccttcattgagctgatcaaaaaccctatttacaaattctgggatcacgatttc
gttcattgcgcaccggaaattgagcgtctcttcgaatctgtggcaaagtcgtgcatggtc
actagcaaaagccagcagcaaattcaaaacgtcgagcctgatattacggagtgtaactaa
DBGET
integrated database retrieval system
