Actinoplanes missouriensis: AMIS_10380
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Entry
AMIS_10380 CDS
T01795
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams00040
Pentose and glucuronate interconversions
ams01100
Metabolic pathways
ams02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMIS_10380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMIS_10380
Enzymes [BR:
ams01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMIS_10380
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Gene cluster
GFIT
Motif
Pfam:
RicinB_lectin_2
Ricin_B_lectin
Pectate_lyase_4
CDtoxinA
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BAL86258
UniProt:
I0GZS1
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All DBs
Position
1111542..1113017
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AA seq
491 aa
AA seq
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MKISKRRAALTAVVLAVPAALVGWAVLPSNAAAAPAAGSTYQLVVKKSGKCIDVPAASAD
NGALLQQWGCTSGAAWQQFKLVASGSNFLIQNVSSGKCIDVPSGSKTSGQRLQQWGCVGS
QTNQQWKVTASGTDTFQIVNVNSGLCISDQGASTANGASIIQETCTANSNKQWAFTPVTG
ATTSPTASSSGRTWASTPDGFASTGGGTTGGAAGTTVTVKTLADLTKYVTATEPYVIKVA
GAITITPKGTELKVKSNKTIVGVGTKGEIVGGGFFLGTGVKNVIIRNLTIRDTQMTEDDP
DDKDFDYDGIQMDTADHIWIDHNKITRMNDGMIDSRKDTTYLTVSWNVLDTGNKAFGIGW
TENVTSRMTIHHNWIKNTNQRNPSVDNVALAHLYNNYLQNVTSYGNLSRGSTKLVLENSY
FDKVANPWNVNDLTKGQLKQSGSIVKNSTGKQVTNGSAFDPKSYYSYTLDAAADVPALLA
KYAGPQANIGN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttccaagaggcgtgccgctctgacggccgtggtgctcgccgtccccgccgcg
ctcgtcggctgggccgtgctgccctccaacgcggcggccgcgccggccgccggcagcacc
tatcagctggtggtgaagaagagcggcaagtgcatcgacgtgccggccgcctcggcggac
aacggggcgctgctgcagcagtggggctgcacctccggcgccgcgtggcagcagttcaag
ctggtcgcgtcgggaagcaacttcctgatccagaacgtgagcagcggcaagtgcatcgac
gtgccgtccggttcgaagacctccggtcagcggttgcagcagtggggttgtgtcggttcg
cagaccaaccagcagtggaaggtcaccgcgtcgggcaccgacacgttccagatcgtcaac
gtgaacagcggcctctgcatctccgaccagggtgcgtcgaccgcgaacggcgcgtcgatc
atccaggagacgtgcacggcgaactcgaacaagcagtgggcgttcaccccggtcaccggc
gcgacgacgtcgcccaccgcgtcgtcgagcggccgcacctgggcgtccactccggacggc
ttcgcgtcgaccggcggcggcaccacgggcggcgcggccggcacgacggtcaccgtgaag
accctcgccgacctgaccaagtacgtgaccgccaccgagccgtacgtgatcaaggtggcc
ggcgccatcacgatcaccccgaagggcaccgagctcaaggtcaagtcgaacaagacgatc
gtcggtgtcggcaccaagggtgagatcgtcggcggcggcttcttcctgggtacgggcgtg
aagaacgtcatcatccggaacctcaccatccgcgacacccagatgaccgaggacgacccg
gacgacaaggacttcgactacgacggcatccagatggacacggccgaccacatctggatc
gaccacaacaagatcacgcggatgaacgacggcatgatcgacagccgcaaggacaccacg
tacctcaccgtgtcctggaacgtgctggacaccggaaacaaggcgttcggcatcggctgg
accgagaatgtgacatcgcggatgacgatccaccacaactggatcaagaacaccaaccag
cggaaccccagcgtcgacaacgtggcgctcgcccacctctacaacaactacctgcagaac
gtcacctcgtacggcaacctgtcgcgcggcagtaccaagctggttctggagaacagctac
ttcgacaaggtcgcgaacccgtggaacgtcaacgacctgacgaagggccagctcaagcag
agcggcagcatcgtgaagaactccaccggcaagcaggtgaccaacgggtccgccttcgac
ccgaagagctactactcgtacaccttggacgcggcagcggacgtccccgcgctcctcgcc
aagtacgccggcccgcaggccaacatcggcaactga
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