Actinoplanes missouriensis: AMIS_46100
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Entry
AMIS_46100 CDS
T01795
Name
(GenBank) putative NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03030
DNA replication
ams03410
Base excision repair
ams03420
Nucleotide excision repair
ams03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMIS_46100
03410 Base excision repair
AMIS_46100
03420 Nucleotide excision repair
AMIS_46100
03430 Mismatch repair
AMIS_46100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ams03032
]
AMIS_46100
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_46100
Enzymes [BR:
ams01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AMIS_46100
DNA replication proteins [BR:
ams03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMIS_46100
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AMIS_46100
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMIS_46100
MMR (mismatch excision repair)
DNA ligase
AMIS_46100
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMIS_46100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
T2SS-T3SS_pil_N
BRCT_2
RHA1_ro05818_N
Motif
Other DBs
NCBI-ProteinID:
BAL89830
UniProt:
I0H9Z3
LinkDB
All DBs
Position
complement(4831456..4833420)
Genome browser
AA seq
654 aa
AA seq
DB search
MTETFASRDEFDQAVAEARRAARAYYDSGDVLMTDADYDALADRIAAATATHPEWDDQGV
TTAVAAGSSAGGDVRHPTPMLSLDKITTPEEVAAFVATLGGDGCLVEVKLDGLAIRAEYV
SGALTLAALRGDGSTGEDVTGQVRRGIAGLPVALGSDWTGEVRGEVYMTVADFEASSANR
VAAGGKAFVNSRGAVAGAIRSVDRVYECPMTFAAYEISGEFDTHLERMAFAGTLGFPAAC
GLIPSVAGERHTAEEVTAAIEEIGAHRDDLDFPIDGAVIKANRDSTRRRLGLASRTPYWA
AAFKYPPDTAATVLRDIEVRVGRTGRITLRAVIDPVYVAGTTVTRATLHNPQWVLDQGLA
IGQTVAVWRAGDVIPRVTTPIGEQPHDLLPWAPPEVCPQCGEAWDKSSLLWRCHTPSCSL
VGAVTYAAGRDCLDVDGLGEEIVIALVESGLVRDLADLFTLTAEQFATTRTGEGNRQVGA
STAARIMAGLEHARQQPFNRVITALGIRMTGRSVGRWLASRFKTMDALRAATVEEIAEID
KMGLIKAQHVVDGLAAMSGVIDRLAAAGLAMAVADDGAAKPLAGQVYVVSGSVPGYTRTT
VSERIEALGGTASGSVSAKTTALVTAETGTSKAKKAAQLGIPVLDPEEFARMLA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacgttcgccagccgtgacgagttcgaccaggccgtggccgaggcgcgccgg
gccgcccgggcctattacgacagcggcgacgtgctgatgaccgacgccgactacgacgcg
ctcgccgaccggatcgccgcggccacggccacccacccggagtgggacgaccagggcgtg
accaccgcggtggcggccgggtcctcggccggtggcgacgtgcggcaccccacgccgatg
ctctccctcgacaagatcaccacgccggaggaggtggccgcgttcgtcgccaccctcggc
ggcgacggctgcctggtcgaggtgaaactcgacggcctggcgatccgcgcggagtatgtg
tcgggcgccctcacgctcgctgcgctgcgcggcgacggcagcacgggggaggacgtcacg
ggtcaggtccggcgcggcatcgccggcctgccggtcgcgctcggcagcgactggaccggc
gaggtgcgcggcgaggtctacatgaccgtcgccgacttcgaggcctccagcgccaaccgg
gtcgccgccggcggcaaggcgttcgtcaactcgcggggcgcggtcgccggcgcgatccgc
agcgtcgaccgggtctacgagtgcccgatgaccttcgcggcctacgagatcagcggcgag
ttcgacacccacctggagcggatggcgttcgccggcacgctcggcttcccggccgcctgc
ggcctgatcccgtcggtcgccggcgaacgccacaccgccgaggaggtcaccgccgcgatc
gaggagatcggcgcccaccgcgacgacctcgacttcccgatcgacggcgcggtgatcaag
gcgaaccgggacagcacccgccgccggctcggcctggcgagccgcacgccctactgggcg
gccgctttcaagtacccgccggacaccgccgccaccgtgctgcgggacatcgaggtgcgg
gtcggccggaccgggcggatcacgctgcgcgccgtcatcgacccggtctacgtcgccggc
accacggtgacccgcgcgaccctgcacaacccgcagtgggtgctcgaccagggtctggcg
atcggccagaccgtcgcggtgtggcgggccggtgacgtgatcccgcgggtcaccaccccg
atcggcgagcagcctcacgacctgctcccgtgggcgccgcccgaggtgtgcccgcagtgc
ggcgaggcgtgggacaagtcgagcctgctgtggcgctgtcacacgccgtcctgctccctg
gtcggcgccgtgacctacgccgccggccgggactgcctcgacgtcgacggcctcggcgag
gagatcgtgatcgccctggtcgagtccggtctcgtccgtgacctggccgacctcttcacg
ctgaccgccgagcagttcgcgaccacccgcaccggcgagggcaaccgccaggtcggcgcc
tccaccgcggcccgcatcatggccggtctggagcacgcccgccagcagccgttcaaccgc
gtcatcaccgccctcggcatccggatgaccggccgttcggtcggccgctggctggcgtcc
cgcttcaagacgatggacgccctgcgcgccgccaccgtcgaggagatcgccgagatcgac
aagatgggcctgatcaaagcgcagcacgtggtggacggcctggccgcgatgtccggcgtg
atcgaccgcctggcagccgccggcctggccatggcggtcgccgacgacggcgccgcgaaa
ccgctggccggccaggtctacgtggtgagcggcagcgtccccggctacacccgcaccacg
gtgagcgagcgcatcgaggccctgggcggcaccgccagcggcagcgtctccgcgaagacg
acggcgctggtcaccgccgagaccggcaccagcaaggcgaagaaggcagcccagctcggc
atcccggtcctggacccggaggagttcgcccgcatgctcgcctaa
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