Actinoplanes missouriensis: AMIS_58590
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Entry
AMIS_58590 CDS
T01795
Name
(GenBank) putative pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams00040
Pentose and glucuronate interconversions
ams01100
Metabolic pathways
ams02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AMIS_58590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMIS_58590
Enzymes [BR:
ams01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AMIS_58590
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BAL91079
UniProt:
I0HDJ2
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All DBs
Position
6272821..6273792
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AA seq
323 aa
AA seq
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MEQKMPGRISRFTLAAALPLALVTGAGAASAAPVQTLAITDLVGWATQNGGTTGGGSAAT
TTVTSASALTTALGSTSAATIRVSGTINCSGMLRVRSNKTIIGNAGAAIVGCGFNINGDR
NVVIRNLSFRNWNDDAINVQESATNIWIDHNSFSNGYDGAVDIKRGSDFITVSWNRVFNH
DKSMLLGHSDSNASQDTGHLRVTYHHNWFDASTQRHPRVRFGNPVHVYNNYYYNNSGYGV
ASTEGAGVLVEANSFEGVDDPYHLGEGSSDAGTLVARNNLLVNSGSGQTGGSVKSIPYSY
TADAASSVKSIVTANAGAGRISL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaaatgcctggccgaatctctcggttcacgctcgcggccgcactgccactc
gccctcgtcaccggggccggcgccgcctccgccgcacccgtgcagacgctcgccatcacc
gacctggtcgggtgggccacccagaacggcggcaccaccggcggcggcagcgccgcgacc
acgaccgtgaccagcgcatccgccctcacgacggcgctggggtcgacatcggcggccacc
atccgggtgtccggcacgatcaactgcagcggcatgctccgggtccggagcaacaagacg
atcatcggtaacgccggcgccgcgatcgtcggttgcggattcaacatcaacggcgaccgg
aacgtcgtcatccgtaacctctctttccggaattggaacgacgacgcgatcaacgtgcag
gagtcggccaccaacatctggatcgatcacaatagtttcagcaacgggtacgacggcgcg
gtcgacatcaaacgcggctcggatttcatcaccgtctcgtggaaccgggtattcaaccac
gacaaatcgatgctgctcggccacagcgacagcaacgcgagtcaggacaccggccacctg
cgcgtgacgtaccaccacaactggttcgacgcgtcgacgcagcggcatccgcgggtccgt
ttcgggaacccggtgcacgtctacaacaactactactacaacaactccgggtacggagtg
gcgtccaccgagggcgccggggtgctcgtggaggcgaactcgttcgagggcgtggacgat
ccgtaccacctgggtgaagggtcgtcggatgcggggacgctggtggcgcggaacaatctg
ctggtcaactcggggagcgggcagaccggcgggtcggtgaagtcgattccgtactcgtac
accgccgacgccgcgtccagtgtgaagtccatcgtgaccgctaatgcgggcgccggccgg
atcagtctctga
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integrated database retrieval system
