Akanthomyces muscarius: LMH87_005660
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Entry
LMH87_005660 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
amus
Akanthomyces muscarius
Pathway
amus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMH87_005660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_005660
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
LMH87_005660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_22
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_11
TPR_17
TPR_7
TPR_6
ARM_TT21_5th
ARM_TT21_N
ARM_TT21_C
TPR_9
TPR_Slam
T7SS_EccA1_N
ARM_TT21_2nd
ARM_TT21
TPR_MalT
BTAD
E_motif
DUF4919
HemY_N
ARM_TT21_4th
DUF3239
Motif
Other DBs
NCBI-GeneID:
80892819
NCBI-ProteinID:
XP_056058882
UniProt:
A0A9W8QPM8
LinkDB
All DBs
Position
1:2085869..2090185
Genome browser
AA seq
1418 aa
AA seq
DB search
MSGFKAALKGINDAVRSHNFDDAITKSQDLLKKDPQSYQANIFLAFALDKKGRTEDAEKV
YKTAASLRPEDGQAWQGLVKLYEKLGPQKLGDYQHAVVNLSHIFHRADDAYKSQDVVDKF
VDFARVRGDRLQYADALWIRLPESPLYSFLEGRFPAPAKTYETIAVILEDFEKKRINTLV
GERRTRLGARLNEVTLEVKREVYAQSRLEHIYQQLINWTTDDELRRTYEEKLIQYCHDRL
LALPAGEQKSAELAKVIGLANDMVVIKHPFRLAWDIAINWQDHKEIKDWSPELIHGYCIH
FPESDLYKVITAFLTSPVSPFPAAAAAPKPSADELTDDSDDDDDGGVPTSVIPLSDEDRI
IMITEGIAGTESSFAYRLVGEFFLHYGEYESTVEYMRKALPFITKEQALSTLDFTKTADA
YCLCLGTSLVYYQSPRHHAEAKSLFEKVLSHDASTTRAMIGVGLIYEEEEEYDQAIDFLE
RALQKDAKNIRVKSEAAWVKALKGDYRPAADELRECLKALNVKEPNKELLADAQYRLGSC
LWNLDTSRQARKQRKGECAYAYWLAALNNNLDHAPCYTMLGIFYNDYVKDKKRARRCFQK
ALELSSSEVISAERLSRSFADDGDWDRVELVAQRVVNSGKVKPPPGSKRKGISWPFAALG
VAELNKHEYHKAIVSFQSAIRLAPEDYHCWVGLGESYHNSGRYVAATKAIMNARKLEEQS
DKDMSADAWFTKFMLGNIKRELGEYDEAIGLYQSVIKTHPGEEGVIIALMQTMVDNALIS
VEKGQFGKAIEFATETVKFATTAEENVLATFNFWKTMGDACSIFSSVQSRTSGFPLGDIR
AILAKAPKESFEISADVDKVSTDIVSAEGIYPEDEQPGVELTRCIQATILCHKVAVHAVS
KDIHAQAVAMFNLGWAEFRAHTCLPAHMRKKSSNYLKAAVRCFKRAIELEAGNADFWNAL
GVVTSEVNGSVSQHSFVRSIHIDERSPVGWTNLGALALLSGDFKVANEAFTRAQSTDPDY
AHAWLGQAFVALLYGDAKEARGLFTHAMDISEASSLSVRQQYSSSMFDHILVGPTNVSVA
SLLQPVFALNQVQSMRPQDFAFGHLASLFLERTHDHTRAVEILQKICSSIEADYEQTESP
LSLARFTLARIDLARAYLASKSYENAIECGEMALGLSSDEQDSELTSEQRKKARLSAHLT
VGLAQFYEKDFDEAEKCFEAALQESDNNPDATCLLSQVLWAQGTEESKEKARSSLFEVIE
AHPGHIQSVLLLGVIGLLDEDEGSLEAVTEELQGLRTNDNVTSKEQAQIGEVLRAIAALA
EGKTADEATAQMQTDIMLHPHLPHGWSALAASAGDKYAAQVSLKVAQRGIPPRGQLDASD
LVGSYAGTGAVGDSQRAAFLAPWETVGWSSLKMTTEGI
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttttaaagcagccttgaagggcatcaatgatgccgtcagatctcataacttt
gatgacgccattacaaagtcccaagacttgctgaagaaggacccccagagttaccaggca
aacattttcttagcttttgctttggacaaaaagggcagaacagaagacgcagaaaaggtc
tacaagacagcggcaagcctgcgccccgaagacggtcaggcctggcaaggtctggtcaag
ctctacgaaaagctcggcccccaaaagcttggagattaccagcatgccgtcgtcaatcta
tctcacatctttcacagagcggacgatgcgtacaagtcgcaggatgttgtagacaaattt
gtggattttgcaagagtcaggggagatcgtctacagtacgccgacgctctctggatccgg
cttcccgagagccctctctattcttttcttgaaggccgattccctgcaccagccaagacc
tacgaaaccattgccgtgattctcgaggatttcgaaaagaagcgcataaacacactcgtc
ggagaacgaagaactcgactcggtgcgagactgaacgaggttactctagaggtgaagcgt
gaagtctatgcgcaaagtagattggaacatatttaccagcagctcatcaactggaccacc
gacgatgaattgagacgcacatacgaagagaagcttattcagtattgtcatgatcgtctt
ctggcccttccggcaggcgagcaaaagagtgcggagcttgcaaaggtaattggcctcgcc
aatgacatggttgttatcaagcatccttttcgactcgcgtgggatatcgccatcaactgg
caagatcacaaggagatcaaagactggagccccgaattgatacacggctactgcattcat
ttccctgaaagcgatttgtacaaagtcatcactgctttcctcacctcgcccgtatcgcca
tttccagctgctgcggctgcaccgaagccatctgccgacgagttgaccgacgacagcgac
gatgatgacgacggtggtgtgcccacttcggtcatccctctcagtgacgaagaccgcatc
attatgattacagaaggtattgctggcacggagtcatcgtttgcgtatcggctcgtcggc
gagttctttcttcattatggagaatatgagagtacagtcgagtacatgcgaaaagcgcta
ccgttcattaccaaagagcaggcgttgagcacgcttgacttcacaaaaacggcggatgcc
tactgtctgtgtctgggtacttcgctcgtttactaccagtcaccgcgacaccacgctgag
gcaaagagcctattcgagaaggtcttgagccacgatgcctcgactactcgtgctatgatc
ggtgtgggtctaatatacgaggaggaggaagaatacgatcaagctatcgactttcttgag
cgagctttgcaaaaggatgccaagaacatcagggtcaaatcagaagccgcgtgggtcaaa
gcactgaaaggcgactaccggcctgccgctgatgagttgcgcgaatgtctcaaggctctg
aatgtcaaagaaccaaacaaggaactccttgcagacgcgcagtatcgtctgggctcctgc
ctgtggaatctcgacacatctcgccaggccagaaagcagcgcaaaggagagtgcgcttat
gcatactggctcgcagctttgaacaataacctcgaccacgcgccctgctacacgatgttg
ggtatattctataacgattatgtcaaggacaaaaagcgtgctcgtcgctgtttccaaaag
gctctggagctatcttcctcggaagtgatatctgctgagcggctctcacgctctttcgct
gatgatggcgactgggatagagttgagctggttgcccaacgtgttgtgaactctggcaag
gttaagccacctcctgggtccaagcgaaagggcatcagctggccattcgctgctctcgga
gttgcggagctgaacaagcacgagtatcacaaagccattgtctccttccagtcagcaatt
cgactcgcgccagaggactaccactgctgggttggcctcggtgagagctaccacaattct
ggaagatacgtcgcagctaccaaggcaatcatgaacgcccgaaagctggaggagcagtcg
gacaaggacatgtcggccgatgcttggttcaccaaattcatgcttggtaatatcaagcgt
gagttgggggagtatgacgaagccattggactctatcagtctgtcatcaagactcatccg
ggcgaagaaggtgtcattatcgcattgatgcaaactatggtggacaatgccctgattagt
gtcgagaaggggcagttcggcaaggctattgagtttgctacggaaacagtcaaattcgcg
acgacggcggaagagaatgttctcgcaactttcaacttttggaagactatgggtgatgct
tgttcaatattttcctcggttcagagtcgtacctccggatttccgttgggtgatatccga
gcgattcttgccaaagctcccaaagaatcgttcgaaatcagcgccgatgttgataaagtc
agcacggatatcgtctccgctgaaggaatatatcccgaagacgagcagcctggtgtcgag
ctgacaagatgcattcaagctaccattttgtgccacaaggttgccgttcatgccgtatcc
aaggatatacacgcccaagctgttgccatgttcaatctcggctgggctgaatttagggcg
cacacgtgcttaccagctcacatgcgcaagaaatctagcaactacctcaaggcagccgtc
agatgcttcaaacgtgctattgagctcgaggctggtaatgccgatttttggaatgcgctg
ggtgtagtgacgagcgaagtcaacggctccgtctcacagcattcatttgtgcgaagcata
cacatagatgagcgcagtcctgtggggtggacaaatcttggtgcactcgccctcttgtct
ggcgacttcaaggtggccaatgaagccttcaccagagcacagtccaccgatcccgactat
gcacacgcctggcttggtcaagcatttgtcgctcttctgtacggcgacgccaaagaagcg
cgcggtctctttacccacgcgatggacatctctgaagcatcgtcactgtcagttcgtcag
caatactcttcgtccatgtttgatcatatcctcgtggggccgacgaatgttagcgttgct
tccctcttgcaacccgtctttgcgctcaatcaagtgcagagcatgcggccgcaagacttt
gcttttggtcaccttgccagcttgtttttggagcgtacccacgaccatacgcgcgcagtg
gagattctacagaagatttgttccagcattgaagcggactatgagcagacggagtctccg
ctgagccttgcacgatttacactagcaagaatcgatcttgctcgcgcgtatcttgcgtcc
aagtcgtacgagaatgccattgaatgcggcgagatggcccttggactaagcagtgatgag
caagatagcgaacttactagcgagcaacgcaaaaaggcgcgactctcggcgcacttaacg
gtcggtcttgctcaattttacgaaaaagactttgatgaggcggagaagtgtttcgaggct
gctctgcaagagtctgacaacaatccggacgcaacctgcctattgtctcaagttttatgg
gctcaaggtacagaagaatccaaagagaaggcgcgctcctcgctatttgaggtaattgaa
gcgcatcccggtcacatccagagcgtgctgctgcttggggtgattggcctgcttgacgag
gatgagggcagcctggaagctgtcaccgaggagctgcagggcctacgcacaaacgacaat
gtcactagcaaggagcaggcgcaaatcggtgaggtgttgcgtgccattgccgcgctcgcc
gagggcaagacggccgacgaggccacggcgcagatgcagacggatataatgctgcaccca
cacctgccgcacggctggtcggcgctggcggcgtcggcaggcgacaagtacgccgcgcag
gtgtcgctaaaggtggctcagagaggtataccacctcgcgggcagctggacgcgagtgat
ttggtgggttcgtacgcagggaccggcgcggttggcgactcgcaaagagcggcgttcctc
gcgccatgggagacggtggggtggtcgtcgctgaagatgacgacggagggaatctag
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