Amycolatopsis sp. DSM 110486: K1T34_45280
Help
Entry
K1T34_45280 CDS
T10626
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
amyd Amycolatopsis sp. DSM 110486
Brite
KEGG Orthology (KO) [BR:
amyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amyd03051
]
K1T34_45280 (pafA)
Enzymes [BR:
amyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
K1T34_45280 (pafA)
Proteasome [BR:
amyd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
K1T34_45280 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF5674
Motif
Other DBs
NCBI-ProteinID:
QYN19726
LinkDB
All DBs
Position
complement(9373655..9375013)
Genome browser
AA seq
452 aa
AA seq
DB search
MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLTQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKIGSANLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALDIQREYHARAVQHLKENGSTPANE
RVVELWGRALEAVEQQDFAKIDTEIDWAIKHRLVERYRAKHDLDLSSPRIAQLDLAYHDI
RRGRGIFDLLQRKGLVKRVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttggcatcgagaccgagttcggggtcacgtgcaccttccacggt
cagcgcaggctctcgcccgacgaggtcgcgcggtatctcttccggcgggtcgtgtcctgg
ggacgctcgtcgaacgtcttcctgtccaacggctcccggctctacctcgacgtgggctcg
caccccgagtacgcgacggccgagtgcgacgacctcacgcaactggtcacgcacgacaag
gccggtgagcggatcctcgaggacctgctggtcgacgccgagcgccggctggccgacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactccgcgggcaattcctac
ggctgtcacgagaactacctcgtgacgcgcgccggcgagttctcccggatcgccgacgtg
ctgctgcccttcctcgtcacccgccagctcatctgcggcgcgggcaaggtcctgcagacc
ccgcgcggcgctgtgtactgcctctctcagcgcgcggagcacatctgggagggcgtctcc
agcgccaccacgcgctcgcgtcccatcatcaacacccgcgacgagccccacgccgacgcc
gagcgctaccggcgcctgcacgtgatcgtgggcgactcgaacatggccgagcccaccacg
atgctcaagatcgggtcggcgaacctggtgctcgagatgatcgaggccggcgtccagttc
cgcgacttcaccctcgacaacccgatccgggcgatccgcgagatcagccacgacctcacc
ggccgccgccaggtccgcctcgccggcggccgcgaggcctcggcgctcgacatccagcgc
gagtaccacgcgcgcgccgtgcagcacctcaaggaaaacggctccacccccgccaacgag
cgcgtggtcgagctgtggggccgcgcgctggaggccgtcgagcagcaggacttcgccaag
atcgacaccgagatcgactgggccatcaagcaccgcctcgtcgagcgctaccgcgcgaag
cacgacctggacctctccagcccccgcatcgcccagctcgacctcgcctaccacgacatc
cgccgcggccggggcatcttcgacctgctgcagcgcaagggcctggtcaagcgcgtcacc
gacgacggcgagatcgaagccgcgaaggacaccccgccccagaccacccgcgcgaagctc
cgcggcgacttcatcgccgccgcccaggccgccggccgcgacttcaccgtcgactgggtc
cacctcaagctcaacgaccaggcccagcgcaccgtgctgtgcaaggacccgttccgctcg
gtggacgagcgagtcgaacgcctgatcagctcgctgtaa
DBGET
integrated database retrieval system
