Amycolatopsis sp. EV170708-02-1: MJQ72_28935
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Entry
MJQ72_28935 CDS
T10873
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amye Amycolatopsis sp. EV170708-02-1
Pathway
amye02024
Quorum sensing
amye03060
Protein export
amye03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
MJQ72_28935 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
MJQ72_28935 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MJQ72_28935 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amye02044
]
MJQ72_28935 (ffh)
Enzymes [BR:
amye01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
MJQ72_28935 (ffh)
Secretion system [BR:
amye02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
MJQ72_28935 (ffh)
Eukaryotic Sec-SRP protein
MJQ72_28935 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
Zeta_toxin
APS_kinase
TctA
ArsA_ATPase
MMR_HSR1
AAA_31
NPHP3_N
AAA_18
AAA_30
AAA_16
NTPase_1
Thymidylate_kin
AAA_33
ParA
MobB
NACHT
6PF2K
TsaE
AAA
AAA_17
ABC_tran
hnRNP_Q_AcD
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UMP00491
LinkDB
All DBs
Position
complement(6383225..6384766)
Genome browser
AA seq
513 aa
AA seq
DB search
MFDTLSDRLTSALQTLSRKGRLSDADIDATAREIRIALLEADVALSVVKDFIARIKERAK
GAEVHGALNPAQQVIKIVNEELVTILGGETRRLTFAKNPPTVIMLAGLQGAGKTTLAGKL
AMWLKKQGHAPMLVACDLQRPNAVTQLQVVGERAGVAVFAPEPGNGVGDPVDVARRAIDE
AKRAQHDIVLVDTAGRLGVDEELMKQAADIRDAVSPDETLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVRQVTGQPILFASNGEKLEDFDLFHPDRMASRILGMG
DVLSLIEQAEQHFDQEKAEQTAAKLGSGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKQLDKLQAIIRGMTPAERADPKIINASRRVRISKGSGVAVRDVNDLVNRF
FEARKMMAQMAGRFGFGGGGGGSKNRKGKKGKKGKGRGPTQPKVRGGFPGGMPMLPPGGG
MPGGAGMPDLSQLGGMNDVPGFDPKKFKLPKDK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgatcggctcacgtccgccctgcagaccctgtctcgcaagggc
aggctctcggacgccgacatcgacgccaccgcgcgcgagatccggatcgcgctgctcgag
gcggatgtcgcgctgtctgtggtcaaggacttcatcgcccggatcaaggagcgcgccaag
ggtgccgaggtgcacggcgcgctgaacccggcgcagcaggtcatcaagatcgtcaacgag
gaactcgtcaccatcctcggcggcgagaccaggcggctcaccttcgcgaagaacccgccg
acggtcatcatgctcgcgggtctgcagggtgccggtaagacgacgctcgcgggcaagctc
gcgatgtggctgaagaagcagggccacgcgccgatgctggtcgcctgtgacctccagcgc
cccaacgcggtcacgcagctgcaggtcgtcggcgagcgggccggtgtcgcggtcttcgcg
cccgagcccggcaacggcgtcggagacccggtcgacgtcgcccgccgcgccatcgacgag
gccaaacgcgcccagcacgacatcgtcctggtcgacaccgccggccgtctcggcgtcgac
gaagagctgatgaagcaggccgcggacatccgcgacgccgtctcgccggacgagacgctg
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaccacggccgaggcgttccgcgac
ggcgtcggcttcaccggtgtcgtgctcaccaagctcgacggtgacgcccgcggtggtgcc
gcgctgtcggtccgccaggtcaccggccagccgatcctgttcgcctccaacggtgagaag
ctcgaagacttcgacctcttccacccggaccggatggccagccggatcctcggcatgggc
gacgtgctcagcctcatcgagcaggccgagcagcatttcgaccaggagaaggccgagcag
accgcggccaagctcggcagcggccagctcaccctcgaagacttcctcgagcagatgctc
gcggtccgcaagatgggcccgatcggcaacctgctcggcatgctgcccggcgccggccag
atgaaggaccagctcgcgcaggtcgacgacaagcagctcgacaagctgcaggcgatcatc
cgcggcatgacccccgccgagcgggccgacccgaagatcatcaacgcctcgcgccgcgtg
cggatctcgaaggggtccggtgtcgccgtccgcgacgtcaacgacctggtcaaccggttc
ttcgaagcgcgcaagatgatggcgcagatggcgggccgcttcggcttcggcggcggaggc
ggcggcagcaagaaccgcaagggcaagaaggggaagaagggcaaggggcgcggcccgacg
cagcccaaggtccgcggcggcttccccggcggcatgccgatgctgcccccgggcggcggg
atgcccgggggagccggcatgcccgacctttcgcagctcggcggcatgaacgacgtaccc
gggttcgacccgaagaagttcaagctgccgaaggacaagtag
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