Amycolatopsis sp. EV170708-02-1: MJQ72_43020
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Entry
MJQ72_43020 CDS
T10873
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
amye Amycolatopsis sp. EV170708-02-1
Brite
KEGG Orthology (KO) [BR:
amye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
amye03110
]
MJQ72_43020 (clpB)
Chaperones and folding catalysts [BR:
amye03110
]
Heat shock proteins
HSP100
MJQ72_43020 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
IstB_IS21
Mg_chelatase
AAA_23
AAA_14
AAA_7
bpMoxR
AAA_18
T2SSE
NACHT
TniB
AAA_24
AAA_25
NBD_SMAX1
Zeta_toxin
AAA_19
DNA_pol3_delta2
Mis12
FTA4
MAD
Motif
Other DBs
NCBI-ProteinID:
UMP03029
LinkDB
All DBs
Position
9353813..9356410
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AA seq
865 aa
AA seq
DB search
MDAFNPTTKTQQAISSAAQAATMAGNPHVAAAHLLGALLAQGEGLTAPLLTAVGADPAQV
HKELEPLIAALPSATGATVSSPQFDTNAVKALTHAQKLATELGDEYVSTEHLLVGLATEG
GPVAELLKRHGATPDALREAFAKVRGSARITSADPESTFKALEKYGVDLTERARAGELDP
VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRGKRVVA
LDLGSMVAGAKFRGEFEERLKAVLKEITDSAGEVVTFIDELHTIVGAGATGEGAMDAGNM
IKPMLARGELRMVGATTLDEYRQHIEKDAALERRFQQVLVGEPSPEDTIAILRGLKERYE
VHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASKLRMEIDSRPVEIDEVERA
VRRMEIEEMALSKEDDAASKERLAALRSELAEKRETLTALTARWQNEKGSIERVRELKEQ
LEQLRGESERAERDGDLGKAAELRYGRIPALEKEFQAATEANEVSQQNVMLKEEVSADDV
ADVVSAWTGIPAGRLLEGETGKLLRMEEELGKRVVGQKEAVQVVSDAVRRTRAGVADPDR
PTGSFLFLGPTGVGKTELAKALAEFLFDDERAMLRIDMSEYAEKHSVARLVGAPPGYVGY
DQGGQLTESVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQAIADPALDERQRNDAVMSVVQRQFKPEFLNRLDDIVVFHALGTDELTSIVDIQ
IERLAARLSRRRLTLDVTDGAREWLALNGFDPIYGARPLRRLVQSAIGDKLAKQLLAGEI
RDGDTVRVDIPAQEASEALTVTRVD
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaacccgaccacgaagacccagcaggcgatctcgtcggcggcgcaggcg
gccaccatggcggggaacccgcacgtggcggccgcacacctgctcggcgccctgctggcg
cagggtgaggggctcaccgcaccgctgctgaccgcggtcggggccgatccggcgcaggtg
cacaaggagctggagccgctgatcgcggcgctgccgtcggcgaccggcgccaccgtgtcg
agcccgcagttcgacacgaacgcggtcaaggcgctgacgcacgcgcagaagctcgcgacc
gaactcggcgacgagtacgtctcgacggagcacctcctcgtcggcctcgccaccgaaggc
gggccggtcgccgagctgctcaaacggcacggcgccaccccggacgcgctgcgcgaggcg
ttcgccaaggtgcgcggctccgcgcggatcaccagcgcggatcccgaaagcacgttcaag
gcactggagaagtacggcgtcgacctgaccgagcgcgcccgtgccggcgagctggacccg
gtgatcggccgcgacaccgagatccgccgcgtggtgcaggtgctctcgcgccgcaccaag
aacaacccggtgctgatcggcgaacccggcgtcggcaagacggccatcgtcgaagggctc
gcccagcgtatcgtcgccggtgacgtgccggagtcgctgcgcggcaagcgcgtggtggcg
ctggacctcggctcgatggtcgcgggcgccaagttccgcggcgagttcgaagagcggctg
aaggccgtgctcaaggagatcaccgactccgcgggcgaggtcgtcaccttcatcgacgag
ctgcacaccatcgtcggcgccggcgcgaccggtgaaggcgcgatggacgcgggcaacatg
atcaagccgatgctcgcccgcggcgagctgcggatggtcggcgcgaccacactcgacgag
taccgccagcacatcgagaaggacgccgcgctggagcggcgcttccagcaggtgctggtc
ggcgaaccgtcccccgaggacaccatcgccatcctgcgcgggctcaaggagcgctacgag
gtgcaccacggtgtgcgcatcaccgacgccgcgctggtcgccgccgcgacgctgtccgac
cgctacatcaccgcccggttcctgccggacaaggcgatcgacctggtcgacgaggccgcc
tcgaagctccgcatggagatcgactcgcgacccgtcgagatcgacgaggtcgagcgcgcc
gtgcggcggatggagatcgaagagatggcgttgtccaaagaggacgatgccgcgtcaaag
gagcgcctcgccgcgctgcgctcggaactggccgaaaagcgggaaacgctgaccgcgctg
accgcgcgctggcagaacgagaagggctcgatcgaacgcgtccgcgaactcaaggagcag
ctggagcagctgcgcggcgagtccgaacgcgccgaacgcgacggcgacctcggcaaggcc
gccgagctccgctacggccggattcccgcgctggagaaggagttccaggccgcgaccgag
gcgaacgaggtcagccagcagaacgtgatgctcaaggaggaggtcagcgcggacgacgtc
gccgacgtggtcagcgcgtggaccggtatcccggccgggcggctgctggaaggcgagacg
ggcaagctgctccggatggaggaggagctcggcaagcgggtcgtcgggcagaaggaggcc
gtgcaggtcgtctcggacgcggtgcgccgcacccgggccggcgtcgccgaccccgaccgg
ccgaccggttcgttcctgttcctcggcccgaccggcgtcggcaagaccgagctggcgaag
gcgctggccgagttcctgttcgacgacgagcgcgcgatgctgcggatcgacatgagcgag
tacgccgagaagcactcggtggcgcgtctggtcggtgcgcctcccggctatgtcggctac
gaccagggcggtcagctgaccgagtcggtgcgcaggcgcccgtattcggtggtgctgctg
gacgaggtcgagaaggcgcatccggacgtgttcgacgtgctcctccaggtgctcgacgac
ggacggctcaccgacggccagggccgcacggtcgacttccgcaacacgatcctggtgctg
acgtcgaacctcggctcgcaggccatcgccgacccggcgctcgacgagcgtcagcgcaac
gacgcggtgatgtcggtggtgcagcgtcagttcaaaccggagttcctgaaccggttggac
gacatcgtggtcttccacgcgctgggcaccgacgagctgacgtccattgtggacatccag
atcgagcggctcgccgcgcggctttcgcggcgtcgcctgacgctggacgtcaccgacggg
gcccgcgagtggctcgcgctgaacggcttcgacccgatctacggcgcgcggccgctgcgg
cggctcgtgcagtcggcgatcggcgacaagctggcgaaacagctgctcgccggtgagatc
cgggacggcgacacggtccgggtggacatcccggcccaggaggcgtcggaggccctgacg
gtcacccgggtggactga
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