Amycolatopsis sp. YIM 10: YIM_27265
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Entry
YIM_27265 CDS
T06270
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amyy03051
]
YIM_27265 (pafA)
Enzymes [BR:
amyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
YIM_27265 (pafA)
Proteasome [BR:
amyy03051
]
Prokaryotic proteasome
Bacterial regulatory particles
YIM_27265 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QFU90627
LinkDB
All DBs
Position
complement(5701250..5702608)
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AA seq
452 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLTQLVTHDKAGERILEDLLVDAERRLGDEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTLLKVGAANLVLEMIEQGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALEIQREYYARAAQHVKTNGSGATAE
RVVELWGRALDAVETQDFSKIDTEIDWAIKHRLVERYRAKHDLDLSSPRIAQLDLAYHDI
RRGRGIFDLLQRKGLVRRVTDDGEIELAKDTPPQTTRAKLRGDFIAAAQAAQRDFTVDWV
HLKLNDQAQRTVLCKDPFRAVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttgggatcgagacagagttcggggtgacctgcaccttccacgga
cagcgcaggttgtcgccggacgaagtggccaggtacctgttccggcgggtggtttcatgg
ggacgttcgtccaacgtcttcctgtcgaacggctcgcggctctacctggacgtcggatcc
cacccggagtacgcgacggccgaatgcgacgacctcacgcagctggtcacgcacgacaag
gcgggggagcggatcctcgaggacctgctcgtcgacgccgagcgcaggctgggtgacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctggtcacgcgggccggtgagttctcgaggatcgccgacgtg
ctgctgccgttcctggtcacccggcagctgatctgcggggcgggcaaggtgctgcagacc
ccgcgcggcgcggtgtactgcctgtcccagcgtgccgagcacatctgggagggtgtgtcg
agcgccacaacgcgctcccggccgatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgctaccgcaggctgcacgtcatcgtcggcgactccaacatggccgagccgaccacc
ctgctcaaggtgggcgcggcgaacctggtgctggagatgatcgagcagggggtgcagttc
cgcgacttcaccctggacaacccgatccgcgcgatccgcgagatcagccacgacctgacc
gggcgccgccaggtgcgcctggcgggcggccgcgaggcgtccgcgctggagatccagcgc
gagtactacgcgcgggcggcccagcacgtgaagaccaacggctccggggccaccgccgag
cgcgtggtggagctgtggggccgggcgctggacgcggtcgagacgcaggacttctcgaag
atcgacaccgagatcgactgggcgatcaagcaccggctggtggagcggtaccgggccaag
cacgacctggacctgtccagcccgcggatcgcccagctggacctggcctaccacgacatc
cggcgcggccgtggcatcttcgacctgctgcagcgcaagggcctggtgcgccgggtgacc
gacgacggcgagatcgagctggccaaggacaccccgccgcagaccaccagggcgaagctg
cgcggtgacttcatcgccgccgcgcaggccgcccagcgcgacttcaccgtggactgggtg
cacctgaagctgaacgaccaggcgcagcggaccgtgctgtgcaaggacccgttccgcgcg
gtcgacgagcgggtggaacgcctgatcagcagtctgtga
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