Amycolatopsis mediterranei RB: B737_1004
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Entry
B737_1004 CDS
T02804
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00521
Streptomycin biosynthesis
amz00523
Polyketide sugar unit biosynthesis
amz00525
Acarbose and validamycin biosynthesis
amz00541
O-Antigen nucleotide sugar biosynthesis
amz01055
Biosynthesis of vancomycin group antibiotics
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01250
Biosynthesis of nucleotide sugars
Module
amz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
B737_1004 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B737_1004 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
B737_1004 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
B737_1004 (rfbB)
00525 Acarbose and validamycin biosynthesis
B737_1004 (rfbB)
Enzymes [BR:
amz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
B737_1004 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
AGT81668
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All DBs
Position
1073132..1074121
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AA seq
329 aa
AA seq
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MRVLVTGGAGFIGSHYVRQVLTGAYPTLRDAEVVVLDKLTYAGNEANLAPVAADPRLKFV
RGDICDTALVTEVMTGVDLVVHFAAESHVDRSILGAADFVLTNVLGTQNLLQAALEAGVG
KFVHVSTDEVYGSIEHGSWTEDHLLEPNSPYSASKASSDLVARSFFRTHGLPVCITRCSN
NYGPYQFPEKVIPLFVTSLLDGGKVPLYGDGLNVRDWLHVDDHCHGIQLVADGGRPGEIY
NIGGGTELTNRSLTEKLLEAVGASWDSVEPVEDRKGHDRRYSVDITKISRELGYAPRVSF
EDGLAATVAWYRDNRAWWEPLAGRAALKK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcctggtcaccggtggtgccggcttcatcgggtcgcactacgtccggcaggtg
ctgaccggcgcctacccgacgctgcgcgacgccgaggtggtcgtgctggacaaactcacc
tacgcgggtaacgaagccaacctggccccggtcgccgccgacccgcggctgaagttcgtc
cgcggcgacatctgcgacacggcgctggtcaccgaggtgatgaccggtgtggacctcgtc
gtgcacttcgcggcggagtcccatgtggaccgctcgatcctcggcgcggccgacttcgtg
ctgacgaacgtgctcggcacgcagaacctgctgcaggcggccctggaagccggcgtcggc
aagttcgtgcacgtgtccaccgacgaggtgtacggctcgatcgagcacggttcgtggacc
gaagaccacctgctggagccgaattcgccctattcggcgtcgaaggcgtcctccgatctg
gtggcgcggtcgttcttccgcacccacgggctgccggtgtgcatcacccggtgttccaac
aactacggtccgtaccagttcccggagaaggtcatcccgctgttcgtcaccagcctgctc
gacggggggaaggtgccgctctacggtgacgggctcaacgtccgtgactggctgcacgtg
gacgaccactgccacggcatccagctggtcgccgacggcggccggccgggcgagatctac
aacatcggcggcggcaccgagctgaccaaccggtcgctgacggagaagctgctggaggcg
gtcggcgcgagctgggacagcgtcgagccggtcgaagaccgcaagggccacgaccgccga
tactcggtggacatcacgaagatcagccgggagctggggtacgctccgcgcgtctccttc
gaggacggtctggccgcgacagtggcgtggtaccgggacaatcgcgcgtggtgggagccg
ctggccggacgggccgcgctgaagaaatag
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