Anoxybacillus sp. PDR2: GRQ40_16325
Help
Entry
GRQ40_16325 CDS
T06397
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
and
Anoxybacillus sp. PDR2
Pathway
and03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
and00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GRQ40_16325 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
and03400
]
GRQ40_16325 (uvrA)
DNA repair and recombination proteins [BR:
and03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GRQ40_16325 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GRQ40_16325 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_22
AAA_21
nSTAND3
APS_kinase
AAA_33
DnaJ_CXXCXGXG
NACHT
BCA_ABC_TP_C
AAA_23
AAA_18
AAA_14
NB-ARC
cobW
Viral_helicase1
MMR_HSR1
NTPase_1
DUF2972
MeaB
PRK
Septin
DUF87
PRiA4_ORF3
Motif
Other DBs
NCBI-ProteinID:
QHC05338
LinkDB
All DBs
Position
complement(3378309..3381176)
Genome browser
AA seq
955 aa
AA seq
DB search
MPMDKITIKGARVHNLKNMDIEIPRDQLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGRP
VCPEHGIEITSQTIEQMVDRILAYPERTKIQVLAPIVSGRKGTHVKTLEEIKKQGYVRVR
IDGEMRELSEDIELEKNKKHSIEVVIDRIVVKEGIASRLADSLETALKLADGKVIIDVVG
EEELLFSEHHACPYCGFSIGELEPRMFSFNSPYGACPDCDGLGAKLEVDRDLVIPNDELT
LREHAIAPWEPQSSQYYPQLLAAVCQHYGIDMDVPVKELPKEQLNRILYGSNGEKIYFRY
ENDFGQIREHYIEFEGVIPNIERRYRETSSDYIREQMEKYMADQPCPTCKGYRLKKESLA
VLVGGKHIGEVASLSVTEALAFFRSLELSEKEQKIAHMILREIIERLGFLNNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIDTLKNMRDIGNT
LIVVEHDEDTMLAADYLIDIGPGAGIHGGQVVAAGTPEEVMNDPHSLTGQYLSGKKFIPL
PPERRKPDGRWLEIHGAKENNLRNVSVKIPLGTFVAVTGVSGSGKSTLVNEILHKALAQK
LQGAKAKPGEYKALKGIEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIREVFAATNEAK
VRGYQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKD
KNIAEVLEMTVEDALAFFENIPKIKRKLQTIYDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHRRSTGRTLYILDEPTTGLHIDDIARLLKVLQRLVDNGDTVLVIEHNLDVIKAADYII
DLGPEGGDKGGRIVAVGTPEEIAEVKGSYTGLYLKRILERDRQRMQAMYEEIKVP
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccaatggataaaattacgattaaaggggcaagagttcataatctaaagaatatggac
attgagatcccgcgagaccaacttgttgttttaacggggttatcaggttcaggaaaatcg
tcgttggcgtttgatacgatttatgcggaagggcagcggcgctatgtcgaatcgctttcg
gcatacgcccgccaatttttaggacaaatggacaagccggatgtcgatacgatcgaaggg
ctatctccggccatttcaatcgatcagaaaacgacgagccgcaatccgcgctccacagtg
ggaacggttaccgaaatttatgattatttgcgcttattgtttgcgcggattggccgtccc
gtttgtccagagcacggcattgaaattacgtcgcaaaccattgaacaaatggttgaccgc
attttagcttacccggaacgaacgaaaattcaagtattagcgccgatcgtatcgggaaga
aaaggaacgcatgttaaaacgctagaagagatcaaaaaacagggatatgtacgcgtgcgc
atagacggcgagatgcgcgagctatcggaagacatcgaattagaaaaaaataaaaagcat
tctattgaagtagtgattgatcgcatcgttgtgaaggaaggcattgcctcgcgcttggct
gattctctggaaacagcgctgaagctggctgacggcaaagtgattattgatgtggtcgga
gaagaggaacttctgtttagcgagcatcacgcttgtccgtattgcggtttttcgattggc
gagcttgagccgcgcatgttttcattcaacagtccgtacggagcgtgtcccgattgtgac
gggctgggcgctaaattggaggtagaccgggacttagtcattccgaatgatgaactcacc
ttgcgcgagcatgcgatcgctccatgggaaccgcaaagctcccaatattatccgcagctg
ttggcggctgtttgccagcattatggaattgatatggatgttccggtaaaggagctgccg
aaggagcagttaaatcgcattctgtatggaagcaatggtgaaaaaatttattttcgttat
gaaaatgactttggacaaattcgcgaacattacattgaatttgaaggggttattcccaat
attgaacggcgttaccgcgaaacaagctctgattatattcgcgagcaaatggaaaaatat
atggctgatcagccgtgtccgacgtgtaaaggctatcgtttaaaaaaagaaagcttagcc
gtgcttgtcggcggcaagcatattggggaagtggcatcgctgtctgtcacggaagcgctc
gcgtttttccggagcttagaattgagtgaaaaagagcagaaaattgcccatatgattttg
cgtgagatcatagaacggcttggtttcctaaataatgtgggcttagattatttaacatta
agccgttcagccggcacattatcaggcggggaggcacagcgcattcgtcttgcgacccaa
attggctcccggctaacgggtgtgctttacattttggacgagccgtccatcggactccat
cagcgtgacaacgatcggctgattgatacgctcaaaaacatgagagacatcggcaatacg
ctgattgtcgtagaacatgacgaagacacgatgctggctgctgattatttgattgacatt
ggtccaggcgccggcattcatggcggccaagtagtggcggccggaacgccggaagaagtc
atgaacgatcctcattccctaacaggccaatatttgtcgggcaaaaagtttattccgctt
ccgccggaacgccgcaagccggatggccgctggcttgaaatacatggtgcaaaagaaaac
aatttaagaaatgtgtccgtgaaaatcccgcttggcacgtttgtggctgtgacaggggta
tcagggtcggggaaaagtacgcttgtcaatgaaattttgcacaaagcgctggcgcaaaaa
ttacaaggagcgaaagcgaagcctggagagtataaagcattgaaaggaatcgagcatctg
gataaagtcattgacatcgaccagtctccgatcgggcgtacgcctcgctccaatccggcc
acgtatacgggagtatttgatgatattcgtgaggtgtttgcagctacgaacgaggcgaag
gtgcgcggctatcagaaaggccgttttagctttaacgtgaagggcggccgctgcgaagcc
tgccgtggcgatggcattattaaaattgaaatgcactttttgccggatgtgtacgttcca
tgtgaagtatgccacggcaaacgctataaccgtgaaacgctggaagtgaaatataaggat
aaaaacattgccgaagtgctggaaatgacggtggaggatgcgctcgccttctttgaaaac
attccgaaaatcaagcgaaagctgcaaacgatttatgatgttggattaggctatatcaag
cttggacagccggcgacaacgctatctgggggagaggcgcagcgggtaaaattggcgtcc
gaactgcatcgccgttcgacagggcgcactctctatattttagatgagccgaccacaggc
ttgcatattgatgatatcgcccgcttgcttaaagtgcttcagcggctggtggataacggt
gatactgtgcttgttattgagcataatcttgatgtcattaaagcggctgattatattatt
gatctcggtcctgaaggtggcgataaaggcggacgaatcgtggcggtgggaaccccagag
gaaatcgccgaagtgaaagggtcctatacgggactgtatttaaaacgcattttagagcgc
gaccgccagcgaatgcaagcgatgtatgaagaaataaaggtgccctaa
DBGET
integrated database retrieval system
