Aspergillus nidulans: ANIA_04965 Help Entry ANIA_04965        CDS       T01016                                  Name (RefSeq) CCR4-NOT core subunit CDC39   KO K12604   CCR4-NOT transcription complex subunit 1 Organism ani  Aspergillus nidulans Pathway ani03018   RNA degradation Brite KEGG Orthology (KO) [BR:ani00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     ANIA_04965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ani03019]     ANIA_04965 Messenger RNA biogenesis [BR:ani03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      ANIA_04965   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      ANIA_04965 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT ARM_Cnot1 Motif Other DBs NCBI-GeneID:  2872761 NCBI-ProteinID:  XP_662569 UniProt:  Q5B3B5 LinkDB All DBs Position III:complement(426960..434057) Genome browser AA seq 2317 aa AA seqDB search MTFPPPPPSSQSSIASGTDKSSSTRPTRSQQSPWGPPVSQSSVRRGLTPLATNLSNPSVS GRGQPQSNSPGPGVSTSSPLTSSFSAVLSSSRGHPLGRGVPSPASTPGPFASYQSGSQQP QSLPSQSLSSPKIRAHTPSSGSHLASAAGSVAGGGGSGGGGGGTGSSRGATFSPLLSGTT VNSPTGFPPDKPGSVAAHGSQSSLAKISIAQVFLLLDSITEKEGREKWETKAAQIHKLVE SNGMEVFSKYFRRLLTGNAPQIFPGLNKSVENAGNYPLLVQEMQKVSQDIEQAQKIAETV DASEGDIFRDFDLSTFLDHFKLDPIVKVSLALTFKTANKSDLRVKADAILANSITPFLQS LASPSDASKDFNNSFIGITIERFILYPPRNFTDDVKSKLLYAASLRYQALGVDMPFEVAS ALQMFNFVNPKYALVRQLHSRGPRATSSSDAVNDTVSAAGPEFWSEEHIASALLFLVLSQ YWREYSLETFLAAVRFHYGGKQINWSLIFRHFDREGLRLDARQFAKLYAALSPIAAEDST LDVQQLWGGEWEHRDTQMSFLTAFINSRTDASQIPNLRATFPHDFFSDGPEPVRLQGERA AKSPLRSLDATRAIFDLALYSQAAWAAAESQMLIKAVVQYDLPVFLCSALALPQPWTSVQ QSFLLRTLAVFIMKQEEGYQLALHGAWRQDKQWVADQLFAMFTQDPTSTAAIYEHAIEYN WLEYLLGYTNGLAMDLACYAHRKGPFELEQWVRNAASKGLMDMGTLLSKYLRIKADDELR VQRREQLAPQMVSLSVKTVFTLLSVLEEYVGDPQNLTPVQRICIQTYPRLINYGEGFDDI IDANGESGNALPEPVDKKMQELFGKMYHEELSLREILELMRQYKSSRDPAEQDLFACMVH GLIDEYHCYHEYPLEALTKTAVMFGGIINFRLVDGITLKVGLGMILEAVREHDIHDPMYK FGVEAIEQLINRLPEWVGFCHLLLQIPSLQGSPIFQKAEEVLREQGSQVRDENGRQDNTT GGSITNGNVDESAAPDGANRKFVSIHVDPPLRPEIYQDPDEEVQDKILFVLNNVSEQNID EKLRDLTDVLKDPHHQWFASYLVEERAKLQPNFQQLYLDLLDRIDDKILWVEVLRETYAS TSKLLNSEATLGSSTERGHLKNLGSWLGSLTIAKDKPIKHKHIWFKGLLLEAYDSQRLTI VIPFTCKVLVQATKSTVFKPPNPWLMDIIALLMELYHFAELKLNLKFEIEVLCKDLEIDH KAIEPSVIIRDRSTTIEESLSTANIPEGLEAFEDMALTSISQSIRNERLSPAAILSTLPS LDKILVLPPSASSMVDSNVLRQIVHSAVERAIAEIITPVVERSVTIASISTVQLVSKDFA MELDEEKFRHAAANMVRQLAGSLALVTCKEPLKVSMTNYIRMIQQEYSDQPMPEGLILMC VNDNLDAACGIVEKAAEEKSLPEIEKVIESQLEARRRHRAARPSEPFIDPSMTRWGLFIP EPYRQTPGGLNKEQLAIYEEFARQARGPGTTHAQNVSTDSGRQLPDVLQEPYPPIPNLST PAEQPAVPHRTPQPQQDTRLQQSALVGTSSQLNGFLETQNPRDRVESLVSDLQQAARNAT EEHVKDLGRDSAVLQEYNQALRSIVASPNGEEVARLTALKACTSLYSQTKSTLEIEVLVH LLAKLCDMSALVARYTWTVLAEVDDEHMFNVPVTVALIDAGLLDIRRVDMILSRLILQKN AAALDVLAELMDQILFNEEPSALRSDFSGSLEAMSKWLAEDSGLARAKEIIKKLRDSGIP EVVNPLLSDKARSKRDQMEYIFTEWIGIYKAPGAVDRTYYAFLKDMHQRQVMANQEDSAL FFRLSIDISVARFEHESQNPSGSLDEAFLYIDALAKLVVLLVKFQGEGTGPVKTSKSAYF NSILSVLLLVLNHHQVMRGEAFNQRVFFRLFSSILCEYSMSGLQHSDQHQEMMFTLANKL LSLQPKYYPSFVYGWFSLVSHRFFMSSMLNMPDRAGWGPYCEIMQVQLSYIGEQLKSTTM TLVTMDLYRGMLRILLILHHDFPEFVAENHFQFCNVIPAHCAQLRNLVLSAYPSSFQKLP DPFREGLKVERLEEMREAPRIAGDTAGPLLRAGIKNVIDNALQSNNVSDSVIQQIRDAVY DTESKESGLFHAPININLLLVNALALYVGQGAVSVNESKGNTRAAFESSAHSALLEKLAK ILRPEARYYLLSAMANQLRYPNSHTYFFSFAILRLFGTDYTEQDESDIRQQIIRVLLERL IVHRPHPWGLIITLQELLQNSSYAFFHLPFIQAAPEL NT seq 6954 nt NT seq  +upstreamnt  +downstreamnt atgaccttccctccccctcccccttcctcccaatcgtcgattgcttctggcaccgataaa tcttcctcgaccaggcctacacggtcacagcaatctccctggggtccgccggtgtcgcag tcgagtgttcgtcgggggttgacaccgcttgcgactaacctttcgaacccctctgtttct ggccgcgggcaacctcagagtaatagccctggtcccggggtttcaacttcatctcctctt acgtcctcgttctccgccgtcttgagctcctcaaggggtcatccgcttggtcggggcgta ccttcaccagcctccactccaggaccctttgcctcgtaccaatctggctcgcagcaaccc cagtcgctacccagccaatctctctcttctcccaaaatcagagctcataccccatcctca gggtcgcatctggcttccgcagcaggatccgtagcgggtggcggaggctccgggggaggt ggaggcgggacgggttcttccagaggcgcaaccttctctccgctgctgtccggcacaacc gtgaattcaccgaccggatttcctcccgacaaaccggggtccgtagcggctcacggaagt cagtcatcattggcgaaaatatcgattgctcaggtattcctgctgttagattcaattacg gagaaagagggccgcgagaagtgggagacaaaagctgcccaaatccacaagctcgttgag tcgaacggaatggaggtcttctcgaagtatttccgacgcctgcttacgggcaatgcgccc caaatctttcctggtctgaacaagtccgttgagaatgcaggaaactacccacttctagtt caggagatgcaaaaggtttcgcaggacattgaacaagcccaaaagatagcggagactgtc gatgcgtcagaaggcgatatttttcgtgatttcgatctttctaccttcctggatcatttc aagcttgaccctatcgtcaaggtttccctggccttgacattcaagaccgcgaataagtcg gacttgcgcgtgaaagctgatgctattctcgcgaactcgatcacacctttccttcagagt ttagcgagtccctcggatgcgtcgaaagactttaacaattcatttattggcataacgatc gaacgcttcatattatacccacctcgcaatttcaccgacgacgttaagtctaaactgcta tatgctgccagtcttcgataccaggcactgggggtggatatgccatttgaagtggcgtcc gcactgcagatgtttaacttcgtcaacccgaagtatgcactagtacggcaacttcattcc aggggaccgagggctacgtcaagctcggatgctgtgaatgatactgtttctgcggccggt ccggagttttggagcgaagaacacatcgcatcggcccttctatttctagttttgtcgcaa tattggcgagagtactctttggagacctttcttgcagctgttcggttccactacggcggc aagcaaataaattggtcgctcatatttcgacactttgaccgcgagggcctaagacttgac gcacggcaattcgcgaagctgtatgcggcgctttcacctatagccgcagaggattcgacg ttggacgttcaacagctctgggggggcgaatgggaacaccgcgatacccaaatgtctttc ctaactgcttttatcaactcacgaactgatgcttctcaaataccaaatctccgtgcgacc ttcccgcacgacttcttctctgacggtcccgagcctgtccgtttgcaaggtgaacgtgcc gccaaatcgcctcttcggtctctggatgccacgagagccatcttcgatctagctttgtat tcgcaagctgcttgggctgcagcagaaagccaaatgcttattaaagctgtcgtgcagtat gatctgcccgtattcttgtgctcagccctagctttaccccagccttggaccagtgtccag caaagctttctcctccgcactcttgctgtttttatcatgaaacaagaagagggatatcaa cttgctctccacggcgcgtggcgtcaggataagcagtgggtagcggatcagctctttgcc atgtttacccaggatcccacctccaccgcagcaatttatgaacacgcaattgagtataac tggttggagtaccttcttggatatacaaatggtcttgccatggaccttgcctgttacgct cataggaaaggtccgtttgaactggagcagtgggttcgcaatgccgcatccaaaggtctt atggacatgggtacacttctatccaaatacctccgtatcaaggccgatgatgagcttcgt gtccagaggagggaacagcttgcgccccagatggtcagcttgtcggtcaaaacagtcttt acactgctgtcggttctagaagaatacgtcggagatccccagaacctcacccctgtgcaa cgaatttgcatccaaacttatccccgactaatcaactacggcgaaggttttgatgatatc atcgatgcgaatggcgaatctgggaatgcattgcccgaacctgtggacaagaaaatgcaa gagctgttcggcaaaatgtaccatgaggagctatctctgagagaaattcttgaactcatg aggcaatacaaatcctctcgcgaccccgcggagcaggatctgttcgcctgcatggtccat ggcctcattgatgaataccattgttaccacgaatatccgttggaggcgctcacgaaaact gctgttatgtttggtggtatcatcaacttccgtcttgttgacggcatcactctgaaagta ggcctgggcatgatactggaagctgttcgagaacatgacatccatgatccgatgtacaag tttggcgtcgaagctattgaacaactgattaatcgtctccctgaatgggtcggcttttgt catcttttactccaaattcccagtttacagggttcgcctatcttccagaaagcagaggag gtgttgcgtgaacaggggagccaagtcagagatgagaacgggcgacaagataatactact ggcgggtcaatcacgaatggtaacgttgacgagtctgcggcaccagacggtgcgaatcgt aaattcgtatccatccacgttgaccctcctcttcggcccgaaatttatcaggacccggat gaagaggtgcaagacaagattttgttcgtgctgaataatgtatcggagcaaaatattgac gaaaaactgcgggatctgacagacgtcctcaaagacccccatcatcaatggttcgcctcc tatttggtggaggaacgcgctaagctgcagccgaatttccagcagttgtatcttgacctt ttggaccgcattgatgacaaaatactttgggttgaagttctccgagagacatacgctagc acgtcaaagcttcttaattcggaagcaactctgggatcctccaccgaaaggggccatctt aaaaatcttggttcatggcttggatctttgactatcgctaaggataagccgatcaaacac aagcatatctggttcaaggggcttctattagaagcttacgatagccaacgactgacgatt gtgattccttttacctgcaaagtgcttgttcaggctacaaagtccaccgttttcaaacca ccaaatccttggctaatggacatcatcgccctgctaatggagctctaccacttcgcagag ttgaagctgaatctcaaattcgagattgaggttctgtgcaaggacctagaaatcgaccac aaggctatcgagccttctgttatcattcgtgaccgttcaacgaccattgaagagtcgttg tcaacagccaatatcccagaaggcctcgaagcttttgaggatatggctcttaccagcatt agccagagcatccgcaatgagagactctcccctgctgctatcctgtcgacacttcctagt ttggataagatcttggtcctaccgccatcggcaagcagtatggtggattcgaatgttctt aggcagattgttcactccgccgtggaacgcgcgattgctgagatcattactcctgtcgtt gagcggtctgtcaccattgcctcaatctccactgttcagttggtttccaaagattttgcc atggagcttgatgaggagaaattccgacacgcggctgccaatatggttagacaacttgcg ggtagcttggccctagtaacctgcaaggagcccctgaaagtcagcatgaccaactatatt cgaatgatccagcaagaatattcagatcaacctatgccggagggacttattcttatgtgc gtcaatgacaacctcgacgctgcttgtggcatcgttgagaaggcagctgaagaaaagtca cttcctgaaattgagaaagtcattgaatctcagctggaagctcgtcggcgccaccgggca gcccgcccaagcgaaccctttattgatccgtctatgacccgctggggtctctttatccct gaaccttaccggcagactccaggtggtctaaacaaggagcaactagcaatatatgaggaa tttgcccgtcaggctcgtggtccaggaaccacccacgctcagaatgtctctactgattct ggtcggcaattgccggacgttctccaagaaccatatcccccaatcccgaatctttccacc cctgcagagcagcctgctgtgcctcacagaacgccgcagccgcagcaagatacccgactg caacagtccgccctggttggaacttcctctcaactcaacggcttccttgaaacgcagaat ccgcgtgacagagtggagagtctcgtctccgatcttcagcaagcggcacgcaacgctacc gaagagcacgtgaaagatctcgggcgcgacagtgctgttcttcaagaatacaaccaagca ttgcgatccattgtagcatcgccaaatggcgaggaggtggcccgactgacagcactcaag gcatgcacaagcctttactcacagactaaaagcactttagagattgaagtacttgtgcac ctgctggccaagttgtgtgacatgtctgccttggttgctcgctatacctggactgtcttg gccgaagtcgatgatgagcatatgttcaacgtccctgtcaccgtggctcttatagatgcc ggacttttggatattcgtcgtgttgacatgatcttgtcgaggcttatcctccagaagaac gctgctgcattggacgtcttagccgaactaatggaccaaattctatttaacgaggagccg tccgctctaaggtctgatttctctggcagccttgaagcgatgagcaaatggcttgccgaa gattcaggtcttgcccgggccaaagaaatcatcaagaagctacgggactctggaattccc gaggtcgtgaacccgctactctcggacaaggctcgatcgaaacgagatcagatggagtat atcttcactgaatggattggtatctataaggcgccgggcgctgttgatcgtacatactat gctttcttgaaagatatgcaccagagacaggtgatggccaaccaagaggattctgcgctc ttcttccgtcttagcatcgatatctcggttgcacgatttgaacacgagtcccagaacccg agcggtagcttggacgaggcgttcctctatatcgacgctcttgctaagttggtcgtctta ctagtcaagttccagggcgagggcaccggtcccgtgaagaccagcaaatcggcgtacttc aattcaatcctgtccgttctgcttcttgtcctgaatcatcatcaggtaatgagaggtgaa gcattcaaccagcgggttttcttcaggcttttctcaagcatactctgtgaatactccatg agcggtctgcagcacagcgaccagcaccaagagatgatgttcaccttggccaacaaactg ctgtctcttcaacccaagtactacccatcgtttgtttacggatggttctcattggtttct catcggttcttcatgtccagcatgctcaacatgccggaccgagcaggctggggaccatac tgtgaaatcatgcaagttcagctgtcctacattggcgagcagttgaagtcaacgaccatg actcttgttacaatggatttatacaggggcatgcttcgcattctgttgatcctccatcat gacttccctgagttcgttgctgaaaatcactttcagttctgcaacgttatccctgcccat tgcgcgcagcttcgcaatttggtcttgagcgcttacccttcctcgttccagaaacttcct gatccattccgcgaaggtctgaaagtcgaacgcttggaggaaatgcgagaggcaccaaga atagcaggtgatactgccggcccattgctacgtgccggtatcaagaacgtcattgataat gcactccagagcaacaatgtgtccgactcagttatccagcaaatccgtgacgctgtctat gatacggaaagcaaggaatcaggtctctttcacgctccaatcaatatcaacttactgctt gtcaacgcactggcactttatgttggccagggggcagtctctgtaaatgaatcaaaggga aatactcgagcagcatttgagagttctgcccactcagcactgctagagaagctcgccaag atcctgcggcctgaagcccgctattaccttctgagcgcaatggcaaaccaactccgctac cctaacagccatacctacttcttcagttttgcgatcctgcgccttttcggtacagattac acggagcaggatgagtcggatattcgccagcagataatccgcgtgctcctggaacgactt attgttcaccgtcctcatccatggggactaatcattacccttcaggagttgctacaaaat agtagctatgcattcttccatcttccttttattcaggctgcgcctgagctctaa

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