KEGG   Aminobacter niigataensis: AMD1_3835
Entry
AMD1_3835         CDS       T09606                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
anj  Aminobacter niigataensis
Pathway
anj00230  Purine metabolism
anj00240  Pyrimidine metabolism
anj01100  Metabolic pathways
anj01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:anj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    AMD1_3835 (nrdJ)
   00240 Pyrimidine metabolism
    AMD1_3835 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anj03400]
    AMD1_3835 (nrdJ)
Enzymes [BR:anj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     AMD1_3835 (nrdJ)
DNA repair and recombination proteins [BR:anj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    AMD1_3835 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N PPP1R32 Acetyltransf_11 GrpE
Other DBs
NCBI-ProteinID: CAI2935109
LinkDB
Position
AMD1:3672557..3676345
AA seq 1262 aa
MRIERRFTKDGQSAYAEIEFRKALSEIKNPDGSVVFRLDNIDVPAQFSQVAADILAQKYF
RKAGVPARLKKVEENDVPSFLWRSVPDEAELAKLPENERYGSEIDARQVFDRLAGTWTYW
GWKGGYFKSEDDARAFKDELSYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFKYGSGTGSNFSHLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVKE
EQKVAALVTGSKIVRQHLSKIMAACVNCEGQDDDCFDPAVNTALKREIKAAKKNAVPENY
IYRVIQFAKQGYSSIEFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVEGDGEWHLT
ARKDGKVLKTLKARDLWEKIGYAAWASADPGLHFNTTMNDWHTCASAGAIRASNPCSEYM
FLDDTACNLASINLLPYRNTDGTIDIAAYEHTVRLWTVVLEISVMMAQFPSKEIAKLSYE
YRTLGLGYANIGGLLMTSGIPYDSDEGRAIGGALTAIMTGVAYATSAEMASELGAFPDYD
RNAANMLRVMRNHRRAAYGDKDGYEKLSVHPVPLVASDLKQQELVTHARAAWDRAIELGE
EHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALRT
LGYSEAQIAEIEAYAVGHGNLNQAPGINPGSLRSKGFSDEKIEALNAALKSAFDIKFVFN
KWTLGEDFCKDVLGLTEAQLNDFSFEMLPALGFSKRDIEAANIHVCGAMTLEGAPFLKDE
HLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKSAYML
SWKLALKANALYRDGSKLSQPLNASLIADEDEDEDDAVEALIAAPAAAKAVQVTEKIVER
VIERLYREREKLPNRRKGYTQKAVVGGHKVYLRTGEFDDGRLGEIFIDMHKEGAAFRAMM
NNFAISISLGLQYGVPLDEYVEAFTFTKFEPAGMVVGNDAIKNATSILDYVFRELAVSYL
GRHDLAHVDQSDFDKTALGKGITEGKALPFSKGLTRGASPLKVVSGVAGNDPKGSAATAS
PARVTPVTAFSGSNVLALAPKAAISAEESTAYKRDYEERAKELVEEVTTEETVEETSVTT
SLFTDAAAQEAAEAKKLAADRRAKSMLQGYTGNSCSECQNFTMVRNGTCEKCDTCGATSG
CS
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgcgcatcgagcggcgtttcaccaaggatggacaatcggcctatgcggagatcgagttc
cgcaaggcgctctccgagatcaagaatccggacggctcggtggtcttccggctcgacaac
atcgatgtgccggcgcagttctcccaggtcgcggccgatatcctggcgcagaagtatttc
cgcaaggccggcgtgcccgcccgtctgaagaaggtcgaggagaacgacgtcccctccttc
ctgtggcgttcggttcccgacgaggccgaacttgccaagctgcccgaaaacgaacgctac
ggctccgagatcgacgcccgccaggtcttcgaccgtctcgccggcacctggacctactgg
ggctggaagggcggctacttcaagagcgaagacgacgcccgcgccttcaaggacgagctg
tcctacatgctcgccacccagcgcgtggcgccgaactcgccgcagtggttcaacaccggc
ctgcattgggcctatggcatcgacggtcctggccagggccacttctatgtcgaccccttc
accggcaagctgaccaagtcgaagtcggcctacgagcacccgcagccacatgcctgcttc
atccagtcggtcgccgacgacctcgtcaacgagggcggaatcatggacctgtgggtacgt
gaggcgcgcctgttcaaatacggctcgggcaccggctcgaacttcagccacctgcgcggc
gaaggtgaaaagctgtccggcggcggccgttcgtccggcctgatgagcttcctcaagatc
ggcgaccgcgctgcgggcgccatcaagtcgggcggcaccacccgccgtgcggccaagatg
gtggtggtcgacgccgaccatcccgatatcgaggcctatatcgactggaaggtgaaggaa
gagcagaaggtggcggcgctggtcaccggttccaagatcgtgcgccagcacctcagcaag
atcatggcggcctgcgtcaactgcgaaggccaggatgacgactgcttcgacccggccgtc
aacaccgcgctcaagcgcgagatcaaggccgccaagaagaacgcggtgccggagaactac
atctaccgcgtcatccagttcgccaagcagggctacagctcgatcgagttcaagacctac
gacaccgactgggattcggaggcctacctcaccgtttcggggcagaactccaacaattcg
gtctcgctcaaggacgacttcctgcgcgctgtcgagggcgacggcgaatggcacctgacc
gcccgcaaggacggcaaggtgctcaagacgctcaaggcgcgcgatctgtgggaaaagatc
ggctacgccgcctgggcctcggcagatcccggcctgcacttcaacaccacgatgaacgac
tggcacacctgcgcctccgcaggcgccatccgtgcgtcgaacccgtgctcggaatacatg
ttcctcgacgacacggcctgcaacctcgcctcgatcaacctgctgccctaccgcaacacc
gacggcaccatcgacatcgcggcctacgagcacacggtgcgcctgtggaccgtcgtgctc
gaaatctcggtgatgatggcgcagttcccgtccaaggagatcgccaagctctcctacgag
taccgcacgctcggcctcggctatgccaatatcggcggcctgctgatgacgtccggcatt
ccctatgactccgacgagggccgcgccatcggtggcgcgctgacggcgatcatgaccggc
gtggcttacgccacctcggccgagatggcctccgaactcggcgccttccccgactatgac
cgcaacgccgcaaacatgctgcgcgtcatgcgcaaccatcgccgcgccgcctatggcgac
aaggacggctacgagaagctgtcggtgcatccggtgccgctggtcgcttccgacctcaag
cagcaggaactggtgacccatgcccgcgccgcctgggaccgcgccatcgagctcggcgag
gagcatggttaccgcaacgcccaggcaaccgtgatcgcgcccaccggcacgatcggcctg
gtcatggattgcgacaccactggcatcgagccggacttcgcgctggtcaagttcaagaag
ctcgccggcggcggctacttcaagatcatcaaccgtgcagtgcccgaggcgctgcgcacg
ctcggctatagcgaagcccagatcgccgagatcgaggcctatgccgtcggccacggcaac
ctcaaccaggcgcccggcatcaaccccggttcgctgcgctccaagggtttcagcgacgag
aagatcgaggcgctcaacgccgctctcaagagcgccttcgacatcaagttcgtcttcaac
aagtggacgctgggcgaggacttctgcaaggacgtgctcggcctgaccgaggcgcagctc
aacgacttctcgttcgagatgctgccggcgctcggcttttccaagcgcgacatcgaagcc
gccaacatccatgtctgcggtgcaatgacgctggaaggcgcgccgttcctcaaggacgag
catctgcccgtgttcgactgcgccaatccctgcggcaagatcggcaagcgctatcttagc
gtcgagagccacatccgcatgatggcggcggcccagcccttcatctcgggcgccatctcc
aagaccatcaacatgcccaacgaggcgacggtcgaggactgcaagagcgcctacatgctg
tcgtggaagctggcgctcaaggccaacgcgctctaccgcgacggctccaagctgtcgcag
ccgctgaacgcctcgctgatcgccgacgaggacgaggacgaagacgatgccgtcgaggcg
ctgatcgcggcacccgccgccgccaaggcggtgcaggtcaccgaaaagatcgtcgagcgc
gtcatcgagcggctctaccgcgagcgggaaaagctgccgaaccgccgcaagggctacacc
cagaaggccgtcgtcggcggccacaaggtctacctgcgcaccggcgagttcgacgacggc
cgcctcggcgaaatcttcatcgacatgcacaaggaaggcgctgccttccgcgcgatgatg
aacaatttcgccatctcgatctcgctcggcctgcaatacggcgtgccgctcgacgaatat
gtcgaggccttcaccttcaccaagttcgagccggccggcatggtcgtcggcaacgacgcc
atcaagaacgccacctcgatcctcgactacgtcttccgcgaactcgccgtctcctatctc
ggccgccacgacctcgcccatgtcgaccagtcggatttcgacaagacggcgctcggcaag
ggcatcaccgaaggcaaggccctgcccttttccaagggcctgacccgcggcgcctccccg
ctcaaggtcgtctccggtgtcgccggcaacgaccccaagggctcggcggctaccgcaagc
ccagcgcgcgtgacgcctgtgaccgccttctccggctccaacgtgctggcgctcgccccc
aaggcggcgatctcggcggaggaatcgaccgcctacaagcgcgactacgaggagcgggcc
aaggaactggtcgaagaagtcacgaccgaagagaccgtcgaggaaacatcggtcacgacg
tcgctgttcaccgacgccgcagcccaggaagcagcagaggccaagaaactcgccgccgac
cgccgcgccaagtcgatgctgcagggctacaccggcaattcctgctcggagtgccagaac
ttcaccatggtgcgaaacggcacctgcgagaagtgtgatacctgcggcgcgacgagcggg
tgcagttga

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