Anaeromyxobacter sp. K: AnaeK_3042
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Entry
AnaeK_3042 CDS
T00748
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ank
Anaeromyxobacter sp. K
Pathway
ank03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AnaeK_3042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ank03019
]
AnaeK_3042
Enzymes [BR:
ank01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AnaeK_3042
Messenger RNA biogenesis [BR:
ank03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AnaeK_3042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACG74264
LinkDB
All DBs
Position
3394215..3395651
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AA seq
478 aa
AA seq
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MVPRLSPTFADLNLSEKTLQALERAGFEHPTPIQAQAIPPALGGRDVIGAAATGTGKTAA
FLLPIIERLAGGAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELERFGRGRHVRGALV
IGGVGMGAQSAALRDHEVIVATPGRLVDHLQQGTARLDGLEVLVLDEADRMLDMGFAPQL
KRILARVPKVRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTLAERAEQRVFLPEQR
EKLPLLLALLEEDDLSTLVFTRTKRRADKVAKALQRAGHKVARIHADRSQAQRRMALEGF
RDGQYRVLVATDIAARGIDVAEIGHVVNFDLPHVPEDYVHRVGRTARMAASGRASAFASP
EELDLLRDIERLTRAPIPRAEVPREHATFQAELQRADAAQANPGPGARPAGMNRNRRRAA
AHRDRLAGGKGAEGAATAGERAPRAQPAASAPRRSAPAAAGAGSKPRRVGSWGPKKRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgcgcttgagcccgacctttgcagacctgaacctctccgagaagacgctccag
gcgctggagcgcgccggcttcgagcaccccacgcccatccaggcgcaggccatcccgccc
gcgctgggcggccgcgacgtgatcggcgccgccgcgaccggcaccggcaagaccgccgcg
ttcctgctccccatcatcgagcggctggccgggggggcgccgaaggatcgcccggcggcc
gcgcacggcaagcccggaccgcgcgcgctggtgctcgcgccgacgcgcgagctggcggtc
cagatcgccggcgagctggagcggttcggccgcgggcgccacgtccgcggcgcgctggtg
atcggcggcgtgggcatgggcgcgcagagcgccgcgctccgcgaccacgaggtgatcgtg
gccacgccggggcgcctggtggaccacctgcagcagggcaccgcgcgcctggacggcctg
gaggtcctggtgctcgacgaggccgaccggatgctggacatgggcttcgcgccccagctg
aagcggatcctcgcccgcgtccccaaggtccgccagacgctgctgttctcggcgaccatg
gccggcgaggtggccgacttcgcgcgcgcgcacctgcgcgatccggtgcgggtcgaggtg
gcgcggagcggcacgctcgccgagcgcgccgagcagcgggtgttcctgcccgagcagcgg
gagaagctgccgctcctgctggcgctgctggaggaggacgacctgtccacgctggtgttc
acccgcaccaagcggcgcgccgacaaggtggcgaaggcgctgcagcgggccgggcacaag
gtggcgcgcatccacgcggaccgctcgcaggcgcagcgccggatggcgctggaaggcttc
cgcgacggccagtaccgcgtgctcgtcgccaccgacatcgcggcgcgcggcatcgacgtg
gcggagatcggccacgtcgtgaacttcgacctgccgcacgtcccggaggactacgtgcac
cgggtcgggcggaccgcgcgcatggccgcgagcggccgcgcctccgcgttcgcctcgccg
gaggagctggacctcctccgcgacatcgagcgcctcacccgcgcccccatcccgcgcgcc
gaggtgccgcgcgagcacgccacgttccaggcggagctccagcgcgccgatgcggcgcag
gcgaacccgggcccgggcgcgcggccggccggcatgaaccgcaaccgccgccgcgccgcc
gcgcaccgcgaccggctggcgggcggcaagggcgcggagggcgccgccaccgcgggcgag
cgggcaccgcgcgcgcagcccgcggcgtccgccccgcggcggagcgcgcccgccgccgcc
ggcgcgggctcgaagccgcgccgcgtcggctcgtggggcccgaagaagcgccgctag
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