Anoxybacillus sp. B7M1: GFC29_2880
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Entry
GFC29_2880 CDS
T04426
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
anl
Anoxybacillus sp. B7M1
Pathway
anl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFC29_2880 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anl03021
]
GFC29_2880 (rpoB)
03400 DNA repair and recombination proteins [BR:
anl03400
]
GFC29_2880 (rpoB)
Enzymes [BR:
anl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFC29_2880 (rpoB)
Transcription machinery [BR:
anl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GFC29_2880 (rpoB)
DNA repair and recombination proteins [BR:
anl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GFC29_2880 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANB64685
LinkDB
All DBs
Position
2918434..2921997
Genome browser
AA seq
1187 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFKEISPIEDFSG
NLSLEFIDYSLGEPKYSVEESKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFSATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGENEYIRNTLEKDNTENTEKALLEIYERL
RPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVHPETG
EIIAEKGTMIDRRTLDRILPYLENGIGFRTYKPFGGVVDEEFTLQSIKIYAPNDPDGEQV
INVIGNGYIAEDVKHITPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKF
GFIETPYRRVDPETGKITDRIDYLTADEEDNYVVAQANARIAEDGTFLDEDIVARFRGEN
IVVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLQPEAPIVGT
GMEYVSAKDSGAAVICKHRGIVERVEAKEIWVRRLVEVDGKEIKGDLDKYRLLKFVRSNQ
GTCYNQRPIVKKGDIVEKGEILADGPSMEKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKEDVYTSVHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIVRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISAGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARKLGLHVASPVFDGAREEDVWAILEEAGMARDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGM
DVTILSSDEKEINMENFDEDDDVQPAEAIAVGIEVEKEEEKDAVTKE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatatggacgacaccgccaacgaagaagttacgcgcgtatt
agtgaggtattggaattaccaaaccttatcgaaattcagacctcctcttaccaatggttt
cttgatgaaggtctgagagaaatgttcaaagaaatttcgccaattgaggatttttccgga
aatctatctcttgaatttatcgactatagcctaggagagccgaaatactcagtcgaagag
tcgaaagaacgcgatgttacatatgcggcaccacttcgcgtaaaagtgcgcctgattaat
aaagaaacaggcgaagtaaaagagcaagatgttttcatgggcgatttccctctaatgaca
gagacgggaacgtttattattaacggtgccgaacgggtcattgtttcgcagcttgtacgt
tctccaagcgtatattatagcggaaaagtagataaaaacggcaaacgcggattctcagcc
actgttatcccaaaccgaggcgcgtggctggagtatgaaacagatgcaaaggacgttgtc
tatgttcgcattgaccgtactcgtaaactgcctgtcaccgtgcttttgcgtgctcttgga
tttggatccgatcaagagattatcgatttaatcggtgaaaacgagtatattcgtaatacg
cttgaaaaagataatacagaaaatacggagaaagcgttactagaaatttacgagcgctta
cgtcctggcgagccgccgacagtagaaaacgcgaaaagcttgcttatttctcgttttttt
gatccaaaacgctatgatttagcgagcgtcggccgctataaaattaacaaaaaacttcat
atcaaaaatagacttttcaatcaacggcttgctgaaacgctcgttcatccggagactggt
gaaattatcgctgaaaaaggaacgatgattgatcgcagaacgcttgatcgaattctacct
tatctcgaaaacgggattggcttccggacatataaaccattcggtggtgtagtagatgag
gagtttacgcttcagtccattaaaatttatgcaccgaatgatcctgatggtgagcaagtc
attaatgtcattggcaacggatacattgctgaagatgtcaaacacattacgccaagcgat
attattgcgtccattagctatttcttcaaccttctccatggagtaggtgacacggatgat
atcgatcatttaggaaaccggcgccttcgttctgtaggagagctgttgcaaaaccaattc
cgtatcggtttatcgcgcatggaacgggtagttcgcgagcgcatgtcgattcaggacaca
aatacgatcacacctcaacagcttattaatattcgtccagtgattgctgctattaaggag
ttctttggcagctcacagctttcacaatttatggatcaaaccaatccgctggctgagctg
actcataagcgccgtttatccgcattaggaccaggcggtttaactcgcgaacgtgcgggt
atggaagtgcgtgacgtacactattctcactatggacgcatgtgtccgattgaaacacct
gaggggccaaacatcggtttaattaactctttatctacgtatgccaaagttaataaattt
ggattcattgaaacaccttatcgccgtgttgaccctgaaacaggaaaaatcacggaccgc
atcgactatttaacggctgacgaagaagataactatgtggtagcgcaggcaaatgccaga
attgctgaggatggaacattcctagatgaagatattgtagcgcgcttccgtggtgaaaac
attgtcgttaaacgcgatcgcgtcgactatatggacgtatcgccgaaacaggtcgtatca
gcggcgactgcgtgtattccattcttagaaaatgacgattccaaccgggcgttgatggga
gcaaacatgcaacgccaagcggtgccgttattgcagccggaagcaccaattgttggtaca
ggaatggaatatgtatcagctaaagattcaggtgctgctgttatttgtaagcatcgtgga
attgttgagcgggtggaagcaaaagaaatttgggttcgccgtttggtggaagttgacggg
aaagagataaaaggcgatctggacaaatatcgtctgcttaaatttgttcgttccaaccaa
ggaacatgctataatcaacgcccaattgtgaaaaaaggcgatattgttgaaaaaggagaa
attctcgcagacggaccatcaatggaaaaaggtgaactggcgctcggtcgcaacgtatta
gttgcctttatgacatgggatggttataactacgaagacgcgatcattatgagcgaacgt
cttgtaaaagaagatgtatatacgtctgttcacattgaagaatatgaatcagaatctcgt
gacacaaaattgggaccagaggaaatcacccgcgatattccaaacgttggagaagacgcg
ttgcgcaatctagatgagcgcggcattgtgcgaattggcgcagaagtaaaagacggagat
ttgctagtagggaaggtcacaccaaaaggggtgacagagctgacagcggaagaacgtctg
cttcatgctatcttcggagaaaaagcgcgtgaagtgcgcgacacctcgcttcgtgtacca
cacggtggcggcgggatcgtactggatgtcaaagtctttaaccgagaagatggggatgaa
cttcctcccggcgtgaaccagcttgtgcgtgtatacattgttcaaaaacggaaaatctct
gctggagataaaatggctggtcgtcacggaaacaaaggggttatctcaagaattcttccg
gaagaagatatgccatttttaccagatggaacaccggtggatatcatgttaaacccattg
ggcgttccttcacgcatgaacattggtcaggtgcttgaattgcatttgggaatggctgcg
agaaagcttggccttcatgttgcttcaccagtattcgatggagctcgcgaagaagacgtt
tgggccattttggaggaagctggaatggcacgtgatgccaaaacggtgctttatgatgga
agaactggtgagccgttcgataatcgtgtctctgtcggaatcatgtacatgattaaactt
gcgcacatggttgacgataagctccatgctcgttctacaggtccatactcgcttgtcacg
caacagccgcttggcggtaaagctcaatttggcggccagcgttttggtgagatggaggtt
tgggctcttgaggcttatggtgcggcatatacgctacaagaaattttgactgtgaagtcg
gacgatgtagtgggtcgcgtaaaaacttacgaagccattgtcaaaggtgaaaatgttcca
gaaccaggcgttccggaatcatttaaagttttaatcaaagagcttcaaagcttaggaatg
gatgtgacgatcctttcaagtgacgagaaagaaatcaacatggaaaactttgacgaagat
gatgatgtccaaccagcagaagccattgccgttggaatagaagtggaaaaagaagaagaa
aaagatgcagtgacaaaggaataa
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integrated database retrieval system
