Arsenophonus nasoniae: ArsFIN_41570
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Entry
ArsFIN_41570 CDS
T05992
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ans
Arsenophonus nasoniae
Pathway
ans03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ans00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ArsFIN_41570 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ans03021
]
ArsFIN_41570 (rpoB)
03400 DNA repair and recombination proteins [BR:
ans03400
]
ArsFIN_41570 (rpoB)
Enzymes [BR:
ans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ArsFIN_41570 (rpoB)
Transcription machinery [BR:
ans03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ArsFIN_41570 (rpoB)
DNA repair and recombination proteins [BR:
ans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ArsFIN_41570 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
SPG4
Motif
Other DBs
NCBI-ProteinID:
QBY45546
UniProt:
D2U3N8
LinkDB
All DBs
Position
complement(3825159..3829187)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFAKFIEQDLEGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFIINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMDYGTEEILNLFFEKTIFQIRDNKLLMT
LIPERLRGETASFDIEANGKVYIEKGRRITARHIRQLEKDKITSIEVPVEYIAGKVVAKD
YIDESTGELICTANTELSLDMLARLSQGGYKTIETLFTNDLDHGAYISETLRTDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEERYDLSAVGRMKFNRSLDRDAIEGSSIL
SKQDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRLVRDGIVT
DEIHYLSAIEEGNYIIAQANTVLDDDGRFVEELITCRNKGESSLFSQEQVEYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRSDKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVALGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLRDAKKDL
TEELRIFEAGLFARIRAVLTNGGIEGEKLDKLPRERWLELSFKDEEKQNQLEQLAEQYDE
LKAEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PVEDMPYDESGNPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINTMLKQQREVAK
LKEFIQKAYDLGDDPRQTVDLSTFSDEEVLRLAHNLKKGMPIATPVFDGAKEKEIKELLT
LAELPTSGQITLYDGRTGEKFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggcaaacgtccgcaa
gttttggatgttccttatcttttatctatccaacttgactcgtttgctaagtttatcgag
caagatttagaaggtcagaatgggctggaagcagcattccgttctgtatttccaattcaa
agctatagcggcaatgctgaattgcaatatgttagctatcgtcttggtgaacctgtattt
gatgttaaagaatgtcagatccgtggtgtcacttattctgctcctttacgggttaaatta
cgtcttgttatttacgagcgtgaagcaccagaaggcacagtaaaggatataaaagagcaa
gaagtttacatgggtgaaattccactcatgacagataatggtacttttattatcaatggt
acagagcgtgttattgtttctcaattacatcgcagtcctggtgtattttttgatagtgat
aaaggtaaaacccattcttcaggtaaggtgttatataatgcacgcattattccttaccgt
ggttcatggttagattttgaatttgaccctaaagataatcttttcgttcgtattgatcgc
cgtcgtaaattaccggcgaccattattctacgtgcgatggattatggtaccgaagaaatc
cttaatctcttttttgagaagacgatttttcaaatccgtgataataagctgttaatgacg
ttaatacccgagcgtttgcgtggtgaaacagcttcttttgatattgaagccaacggtaaa
gtctatattgaaaaaggacgccgcattacagcacgtcatattcgtcagctagaaaaagac
aaaattactagtatcgaagtgcctgttgaatatattgcaggtaaagtggtcgctaaagat
tatattgatgaaagtaccggcgagttaatctgtacagctaatacagagctttctctggat
atgttggcacgtttaagtcaaggtggttataaaaccattgaaaccttatttactaatgac
ttagatcatggcgcatatatctcagaaacattgcgtactgatccaaccaatgatcgttta
agtgcgttagttgaaatttaccgtatgatgcgcccaggcgaaccacctacgcgcgaagcg
gcagaaaatttgtttgagaacttattcttttctgaagagcgttacgatctttctgctgta
gggcggatgaagtttaatcgttcactcgatcgtgatgcaattgaaggctcaagtatctta
agcaaacaagatatcattgatgtgatgaaaaaactcattgatattcgcaatggtaaaggt
gaagttgatgatattgaccatttaggtaaccgacgtattcgttcggttggtgaaatggct
gaaaatcaattccgagttggtttagtgcgagtcgagcgtgcggttaaagagcgtttgtca
ttaggtgatttagatgcattaatgcctcaagacatgattaacgcgaaaccaatttctgct
gcggttaaagagttctttggctcaagtcaattgtcgcagtttatggatcagaataatcca
ctctctgaaatcacccataaacgtcgtatttcagcattaggcccaggtggactaacacgt
gagcgagcgggttttgaagttcgtgacgtacacccaacccactatgggcgtgtatgtcca
attgagacgcctgaagggccgaatatcggtttgattaactcattgtctgtctatgcacaa
accaatgagtatggttttttggaaacaccttatcgcttggtacgggatggtatcgtaact
gatgaaattcattatttatcagcgattgaagaaggtaactacatcattgctcaggcaaat
actgttttagatgatgatggtcggttcgttgaagaattaattacttgccgcaataaaggt
gaatccagtctatttagtcaagaacaagtagaatatatggacgtttcaacccaacaggtt
gtatctgttggtgcttcattaattccattccttgagcatgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcagtaccgacgttacgttcagataaaccactcgtt
ggaacgggtatggaacgtgctgttgctgttgactctggagtaaccgcagttgctaaacgt
ggtggtaccgtccagtatgtagatgcttcacgtattgttatcaaagttaatgaagatgag
atgtatcctggtgaagccggcattgatatttataatctgacaaaatatacgcgttctaat
cagaacacttgtattaatcagatgccatgtgttgcgctgggtgagccgattgagcgtggc
gatgttttggctgatggcccatcgacagatttaggtgaattggcacttggtcaaaatatg
cgcgttgcgttcatgccctggaatggttataactttgaagattccattttggtctctgaa
cgagtggtacaagaagatcgttttactaccattcacattcaggaattagcttgtgtatcg
cgtgatactaagttagggccagaggagattactgcagatattcctaacgtaggggaagcg
gcactatctaaattggatgaatcagggattgtttatatcggtgcagaagtaacgggcggc
gacattctggttggtaaggtaacaccgaaaggtgaaacccaattaacgccagaagagaaa
ctgctgcgcgctatttttggtgaaaaagcttctgacgtcaaggattcttcactgcgggta
ccaaatggggtatcaggaacggttattgatgtacaagtctttacccgcgacggtgtagag
aaagataaacgtgcattagaaattgaagaaatgcagcttcgggatgcgaagaaagactta
acggaagagttgcgtatctttgaagccggtttatttgcccgtatcagagcagtactaact
aatggcggtattgaaggtgagaagctggataaattaccgcgtgagcgttggttagaatta
tcgtttaaagatgaagaaaaacaaaatcagttagagcaattggctgagcagtatgatgag
cttaaagctgaatttgagaagaagctagaggctaaacgtcgtaagatcactcaaggtgat
gatttagcaccaggcgtattgaaaatcgttaaggtttatttggcagtaaaacgtcaaatt
caaccaggcgataaaatggctggtcggcatggtaacaaaggggttatttccaaaattaac
ccagttgaagacatgccttacgatgaaagtggtaaccctgttgatatcgttttgaaccca
ctgggcgtaccatcacgtatgaatattggtcagattctggaaacccatttgggtatggct
gctaaaggtattggcgataagatcaataccatgctgaaacaacagcgtgaagtagctaaa
ttgaaagaatttattcagaaagcttatgacttaggagatgatcctcgtcaaacagttgat
ctcagtaccttttctgatgaagaagttctgcggttagcacataatttgaagaaaggtatg
ccaattgcaacaccggtctttgatggtgcaaaagaaaaggaaatcaaagaactattgact
ttagctgagttgccgacttctggtcagattacattgtatgatggccgtacaggcgagaaa
tttgaacgtcaggtaacagttggttatatgtatatgctgaaactgaatcatcttgttgat
gataaaatgcatgcacgttcaacaggctcctacagtctggttactcaacaaccgttgggt
ggtaaagcacagtttggtggtcagcgttttggtgagatggaagtttgggctctggaagca
tatggtgccgcttacaccttgcaagaaatgcttaccgttaaatccgatgatgtgaacgga
cgtactaagatgtataaaaacatcgtagacggcaaccatcagatggaaccagggatgccg
gagtctttcaatgtattattgaaagagatccgctcgttgggtattaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
