Arvicanthis niloticus (African grass rat): 117703605
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Entry
117703605 CDS
T08817
Symbol
Traf1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04064
NF-kappa B signaling pathway
anu04210
Apoptosis
anu04668
TNF signaling pathway
anu05200
Pathways in cancer
anu05202
Transcriptional misregulation in cancer
anu05203
Viral carcinogenesis
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
117703605 (Traf1)
04668 TNF signaling pathway
117703605 (Traf1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117703605 (Traf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117703605 (Traf1)
05202 Transcriptional misregulation in cancer
117703605 (Traf1)
05203 Viral carcinogenesis
117703605 (Traf1)
09162 Cancer: specific types
05222 Small cell lung cancer
117703605 (Traf1)
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
117703605
NCBI-ProteinID:
XP_034351229
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Position
2:complement(12102008..12120206)
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AA seq
409 aa
AA seq
DB search
MASSSAPDENEFQFGCPPAPCQDPPEPRALCCTACLSENLRDDEDGICPKCRADDLHPVS
PGSLLTQEKVHPDIAEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLGVLKEWK
SSPGSNLGSAPMALERNLSELQLQAAVEVTGDLEVDCYRAPCCESQEELTLQHFLKEKLL
AQLEEKLRVFANIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLAQKD
QVLGKLEHSLRLMEEASFDGTFLWKITNVAKRCHESVCGRTVSLFSPAFYTAKYGYKLCL
RLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLS
SASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctcagcccctgatgaaaacgagtttcaatttggttgcccccctgctccc
tgccaggatccaccggagcccagagctctctgctgcacagcctgtctctctgagaacctg
agagatgatgaggatgggatctgtcctaaatgcagagcagacgacctccaccctgtgagc
ccaggaagccttctgactcaggagaaggttcaccctgatatagctgaggctgaaatcatg
tgtccctttgcaggtgttggctgttccttcaaggggagcccacagtccatgcaggagcat
gaggccacttcccagtcctcccacctgtacctgctgctgggggtcttaaaggagtggaaa
tcctcaccaggctccaacctgggctctgcgcctatggcactggagaggaacctgtcagag
ctgcaacttcaggcagctgtggaagtgacaggtgacctggaggtagactgctaccgggca
ccttgctgtgagagccaggaagaactgaccctgcagcacttcctaaaggagaagctgctg
gctcagctggaggagaagctgcgtgtgtttgcaaacatcgttgctgtcctcaacaaggaa
gtggaggcttcccacctggcactggccgcctccatccaccagagccagctggaccgagag
cacatcttgagcttggaacagagggtggtggagttacagcagaccctggctcaaaaagac
caggtcctgggcaagcttgagcacagtttgcgactcatggaggaggcgtcctttgatggt
actttcctgtggaagatcaccaatgtcgccaagcggtgccatgagtcagtgtgtggcagg
actgtcagcctcttctctccagctttctacactgccaagtatggttataagctgtgcctg
cgcttatacctgaacggggatggctcaggcaagaagacccatctgtccctgttcatcgtg
atcatgagaggagaatatgatgctctgctgccttggcctttccggaacaaggtcaccttt
atgctacttgaccagaacaaccgtgagcacgccattgatgccttccggcctgacctgagc
tcagcctccttccagcggccgcagagcgagaccaacgtggccagtggctgcccactcttc
ttccccctcagcaagctgcagtcacccaagcacgcctacgtaaaagatgatacaatgttt
ctcaaatgcattgtggacactagtgcttag
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