Arvicanthis niloticus (African grass rat): 117704203
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Entry
117704203 CDS
T08817
Symbol
Crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117704203 (Crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117704203 (Crnkl1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117704203 (Crnkl1)
Spliceosome [BR:
anu03041
]
Complex B
Other components
Prp19-related factors
117704203 (Crnkl1)
Complex C
117704203 (Crnkl1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117704203 (Crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
117704203
NCBI-ProteinID:
XP_034352136
LinkDB
All DBs
Position
2:complement(115744547..115762228)
Genome browser
AA seq
691 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELE
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRTIPLWLK
YAEMEMKNRQINHARNIWDRAVTTLPRVDQFWYKYTYMEEMLNNPPGARQVFERWMEWQP
EEQAWHSYINFELRYKEVEKARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYRYALDRIPKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANV
PPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRN
FEDEFGTASDKERVDKLMPEKVKKRRKVQADDGSDAGWVEVYDYIFPEDAANQPNLKLLA
MAKLWKKQQQEREAVEQDPDKDIDESEASSF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccacagcagccgggaaacagcggattcctaaagtggccaaggtgaaaaac
aaagcgcctgcagaggtacagataactgctgagcagcttctaagagaagctaaagaaaga
gaactcgagctcctcccgcctccacctcagcagaagatcacagacgaagaagaattagag
gattacaaactacggaaaaggaagacttttgaagataacataagaaaaaatagaactgtg
attagcaactggataaaatatgcacaatgggaggaaagtctaaaggagattcaaagggct
cgatccatatacgagcgtgctttagatgtcgactaccggactattccactctggctgaaa
tatgcagaaatggaaatgaagaaccgccagatcaaccatgcccgaaatatctgggaccgt
gccgtaacaactctgccacgagtcgaccagttctggtacaagtacacatacatggaggag
atgttgaacaatcctcctggtgctcggcaggtgtttgaacgctggatggaatggcagcct
gaggagcaggcctggcactcctatatcaacttcgagctgagatacaaagaggtggagaag
gcccgcaccatttatgaacgctttgtgctcgtgcatcctgctgtgaagaactggatcaag
tatgctcggtttgaagagaagcatgcttattttgctcatgctcggaaagtctacgagaga
gcggttgagttttttggggatgagcatatggacgaacacctgtatgtggcctttgctaaa
tttgaggaaaaccagaaagaatttgaaagggtacgggttatctacagatatgccctggat
aggattccaaaacaagaagcccaagaactctttaaaaactataccatctttgagaagaag
tttggtgaccggaggggtatagaagatatcatcgtgagcaagcggagattccagtatgaa
gaagaagtgaaggctaatccacacaattatgatgcatggtttgattatttacgcttggtg
gaaagtgatgcagaagctgacactgttcgggaagtctatgagagagccattgccaatgtg
ccacccatccaggagaagaggcactggaagcgctacatctacctctggattaactatgca
ctctatgaagagctggaggccaaggatcctgagaggacaagacaggtatatcaagcatct
ttggaactaattcctcacaaaaagttcacatttgccaaaatgtggttatattacgcacag
tttgaaataagacagaaaaatctgccatttgccagaagagctctgggaacttccataggc
aaatgtccaaagaacaagttattcaaaggttacatagaactggaactacagcttcgagaa
tttgacagatgcagaaagctttatgaaaagtttttggaatttggacctgaaaattgtaca
tcatggattaagtttgcagaattagagacaatccttggtgatattgagagagctcgggca
atatatgaattagccatcagccagccacgcttggatatgccagaggtactttggaaatca
tatattgattttgagattgagcaggaagaaactgagagaacaagaaacctttaccgacag
ttgcttcagcgaacacagcacgtcaaggtatggattagttttgctcagtttgagttatct
tctgggaaagaagaaggaagtgtggctaaatgcagacagatttatgaagaagctaacaag
accatgagaaactgtgaggaaaaagaagagaggcttatgttgctggaatcctggcgaaat
tttgaagatgaatttggaacagcatcagacaaggagagagtagacaaactcatgccagaa
aaggtcaagaagagaagaaaggtccaggccgacgatgggtctgatgccggatgggtagaa
gtctatgactacatctttccagaggatgctgccaaccagcctaacctcaagcttctggcg
atggccaagctttggaagaaacagcaacaggaaagagaagctgtggaacaggatccagat
aaggacattgatgagagtgaagcctcatctttttaa
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