Arvicanthis niloticus (African grass rat): 117706871
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Entry
117706871 CDS
T08817
Symbol
Sec24b
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117706871 (Sec24b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117706871 (Sec24b)
Membrane trafficking [BR:
anu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117706871 (Sec24b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
GDC-P
Motif
Other DBs
NCBI-GeneID:
117706871
NCBI-ProteinID:
XP_034355886
EnsemblRapid:
ENSANLG00005011080
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All DBs
Position
4:complement(107199828..107275047)
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AA seq
1268 aa
AA seq
DB search
MPPKLGGVVPGLAPPQQNGPAQSQMQVPSGYGLPHQNYMASSGHYSQGPGKMASLPLDNQ
CDNYYSRPYTVPTQNVGTPSSVNQPGAQQMYGRGPSVPHMGGPTPGSFQGAPASASHSST
SVSQPYSSLGNRYSSPAAYSANASVASQGYPSTCSHYPISTVSNVVYPNVSYPSLPASEP
YGQMFTSQNAPPPARPLKEPYSGPSTAITYPSRPPPPPSQQQQQQQSHSGYSSLSWSGPG
LPPAQDSLIRNQMGSLATANSHPTNNENVQLTKSSSVVSTVLPGPSSTRMPPAPSHPVGP
VPSIPPPPEQMQTKVRFPVPSHAGCGKWRPVNRDPGLWGACIGRMRERPPEKFANKGMQY
GDYVNNQASSTPTPLSSASDDEEEEDEDEEAGVDSSSTTSSASPLPNSYDALEGGSYPDM
HSSSASSPVPDRALEPNSSLAQALSAAPTPAAAQPAKVAKPFGYGYPTLQPAYQNAAPPP
TPAAHPSGPVYSGYPQHYPGVNQLSSGLGGLSLQSSPQPESLRPVNLTQEKNILPATPIW
APVPNLSAELNKLNCSPDSFRCTLTSIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSN
TIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFLYNPLTRSYGEPHKRPEVQNS
TVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLAVLCQSLLENLDKLPGDSRTRIGF
MTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMF
INTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVHH
LGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIFYYPSFHSTHNP
SQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGF
AVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLAEVYAGVDVQAAIC
LLANMAVDRSVSSSLSDARDALVNAVVDPLSAYSSAVSGGPRSTLTAPSSLKLLPLYVLA
LLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLMKMIHPNLYRIDRLTDEGAIHVNDRVV
PQPPLQKLSAEKLTREGAFLMDCGSVFYIWIGKGCDNNFIENVLGCPDFASVPQKMTQLP
ELDTLPSERTRSFVTWLRDSRPLSPVLHMVKDESPAKTDFFQHLIEDRTEAAFSYYEFLI
HIQQQICK
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagctcggcggagtagtccccggcctggcgccgccgcagcagaacggtcca
gcacagagtcaaatgcaagttccatctgggtatgggttgcctcatcaaaactatatggcc
tcctcaggacattactctcaaggacctgggaaaatggcttccttgccattggataaccag
tgcgataattactactctcgtccatatacagtaccaacacaaaatgtggggactcccagc
tcagtaaaccaaccaggagcacagcagatgtatggcagaggtccttctgtccctcacatg
gggggacccacgccaggatctttccaaggagctccagcatcagcatcccactcatctacg
agtgtctcccagccctattcctctcttgggaatcgctacagtagtcctgccgcgtactct
gccaacgcttctgtcgcttctcagggatatccctccacctgtagtcattatcccatctca
actgtgtcgaatgttgtgtatcctaatgtttcatatccctcactgcctgccagtgagcca
tatgggcagatgtttacctcacagaatgctcctccacctgccaggccacttaaagagcca
tactctggcccaagcacagctattacctacccatcgagacctccacctccgccttcccag
cagcagcagcagcagcagagtcattcaggatacagttctctatcatggtcaggtccaggc
cttccaccagctcaagacagcctcatccgaaaccagatgggatccttggctacagccaac
agccacccaacaaataacgaaaatgtccaacttaccaagtccagctctgtagtatccaca
gttttgccaggaccctcatcaacaagaatgccacctgctccaagtcacccagttgggcct
gtgccgtccattccaccacccccagagcaaatgcagacaaaagtcaggtttccagtacct
agccatgctggatgtggcaagtggcgccctgtgaacagagaccctggactgtggggagct
tgcatcggtcggatgagggaacgccccccagagaagttcgcaaataaaggcatgcagtat
ggtgactatgttaataatcaagctagctccacaccaactcccttgtcatcagcttccgat
gatgaggaagaggaggatgaggatgaggaagcaggtgtagacagctcttctaccacgagc
agcgcttcacccttgcccaacagttacgacgccttggaaggaggcagctacccagatatg
cattcttcttcagcaagcagccctgttccagatcgtgccctggaacctaactcctccctc
gcccaggctctgtctgcagcccccactcccgctgctgctcagccagcaaaggtagcaaag
ccctttggctatggctacccaactctgcagcctgcctatcagaatgcagcaccaccaccc
acccctgcagcacatcccagtggccctgtgtattctggatatccccagcattacccaggg
gtgaaccagctgtcctcaggtctaggaggactaagccttcagagttctccacagccagaa
agcctaagacctgtaaacctcacccaggagaagaatatcttacctgcaacacctatttgg
gctcctgtacccaacttgagtgcagaactcaacaagttaaactgtagcccagattccttt
cgatgtaccttgaccagtatcccacagacacaggctttactgaataaagctaagcttcct
ttaggattgttgttgcatcccttcagagacctgacgcaattgccagtgataacctcaaac
accattgtgaggtgccggtcctgtcggacgtacatcaacccgttcgtgtccttcatcgat
cagcggagatggaagtgcaacctgtgctatagagttaatgatgttccagaagagtttttg
tacaaccccctgactcggtcttacggagagcctcataaacggccggaagttcagaattcc
actgtggagttcatcgcttcctcagactacatgctccggcctcctcagcctgctgtctac
ttgtttgttttagatgtatctcacaacgcagtagaagctgggtatttggcagttttatgc
cagtccttattagaaaacttagacaagcttcctggagattcacgaacaagaataggattc
atgacttttgacagcaccattcatttctacaatctacaggaaggattatcccagcctcag
atgttgattgtatctgatatagacgatgtttttctgcccacgccggatagtctgcttgtg
aatctgtatgaaagtaaagagcttataaaagacttattgaacgcattaccaaatatgttc
atcaataccagagaaacgcatagtgcccttggacctgcacttcaggctgccttcaaacta
atgtctcccacgggtggccgagtgtctgtatttcagacacagttaccttccttgggggca
ggacttctgcagtccagagaagatccaaatcagaggtcaagtaccaaggtggtgcaccat
cttggccctgcaaccgatttttataagaagcttgctttagactgctcaggacagcaaact
gcagtggatttgttccttctgagttcacagtattctgaccttgcttctctggcttgcatg
tccaagtactctgcagggtgcatattctactatccatctttccactctacccacaatcct
tcgcaagcagaaaagttacaaaaagacctgaaacggtacctcactaggaagattggattt
gaagctgtcatgagaataagatgcactaaaggactttcaatgcatactttccacgggaac
ttctttgtccgttccactgacttactgtctcttgccaacattaatcctgacgctggattt
gcagtacagctatcaattgaagaaagtctgacagatacttccttagtgtgctttcagaca
gccctgttgtacacatcaagcaaaggcgaacggagaattcgggtgcatacactgtgctta
ccagttgtaagttcgctcgctgaagtttatgcaggagtagatgtgcaagctgccatctgc
cttctggccaacatggctgtggaccgctcagtgtcctcgagcctgtcggatgccagggat
gccttggtgaatgcagtggtggacccgctgtccgcctacagctcagcagtgtcgggtggg
ccccgctccaccctgacagcaccaagctcactgaagctgctcccgctctatgttttggca
cttctcaaacagaaagcattcagaacaggtacaagcacgcgcctggatgaccgtgtgtat
gccatgtgtcagatgaagtcgcagccacttgtgcatctaatgaagatgatccatcccaac
ttatacaggatagacaggctgacagacgagggcgccatccatgttaatgacagggtagta
cctcagccacctcttcagaaactgtctgcagagaaactgaccagagaaggcgctttcctc
atggactgtggctcagttttctacatttggattggcaaaggctgtgacaataacttcata
gagaatgtgcttgggtgtcctgattttgcatcagtaccacagaaaatgacacagcttcca
gagctagacacacttccatcagaaagaactagatcctttgtgacttggcttagagacagc
cgaccattaagccctgtcctgcacatggtaaaagatgagagtcctgccaaaacagatttt
ttccagcatttgattgaagaccgcacggaagccgcgttctcctattacgagtttctcatt
cacatccagcagcagatttgtaagtga
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