Arvicanthis niloticus (African grass rat): 117707591
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Entry
117707591 CDS
T08817
Symbol
Clrn1
Name
(RefSeq) LOW QUALITY PROTEIN: clarin-1
KO
K23841
clarin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117707591 (Clrn1)
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117707591 (Clrn1)
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Gene cluster
GFIT
Motif
Pfam:
Clarin-2
PsbN
MORN
Motif
Other DBs
NCBI-GeneID:
117707591
NCBI-ProteinID:
XP_034356898
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Position
4:complement(41848562..41882767)
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AA seq
250 aa
AA seq
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MPSQQKKAIFCMAGILSFLCALGVVTAVGTPLWVKATILCKTGALLVNASGKELDKFTGE
MQYGLFHGEGVRQCGLGARPFRFSLRSMKERYSXYEDKGEKAVFPDLVQAIPVSIHVNII
LFSMILVVLTMVGTAFFMYNAFGKPFEALHGPLGLYLISFISGSCGCLVMILFASEVKIH
RLSEKIANFKEGTYAYRTQNENYTTSFWVVFICFFVHFLNGLLIRLAGFQFPFTKSKETE
TTNVASDLMY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccagcagaagaaagccatcttttgcatggctggcatattgagctttctctgt
gctcttggagtggtgacggcagtggggaccccactgtgggttaaagccactatcctctgc
aaaacaggggccctgcttgtcaatgcgtcagggaaggagctcgacaagttcacgggcgag
atgcagtatggccttttccacggagaaggcgtaaggcaatgtgggttaggagcaaggcct
ttccggttctcattaaggtcaatgaaggagaggtactccnngtatgaggacaagggagag
aaggcagtcttcccagatttggtccaagccatccccgtaagcatccacgtcaatattatt
ctcttctccatgattcttgtcgtcttaaccatggtggggacagccttcttcatgtacaat
gcttttggcaagccctttgaagctctgcatggaccactggggctgtatctgatcagcttc
atttcaggctcctgtggctgtcttgtcatgatattgtttgcctctgaagtgaaaatccac
cgcctttcagagaaaattgcaaattttaaagaagggacctatgcctacagaacgcaaaat
gagaactataccacctcattctgggttgttttcatttgcttttttgttcattttctgaat
gggctcctgatacgacttgctggatttcagttccctttcacaaaatctaaagaaacagag
accactaatgtagcttcagatttaatgtactga
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