Arvicanthis niloticus (African grass rat): 117719723
Help
Entry
117719723 CDS
T08817
Symbol
Ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03082
ATP-dependent chromatin remodeling
anu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117719723 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117719723 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117719723 (Ss18)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117719723 (Ss18)
GBAF(ncBAF) complex
117719723 (Ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117719723
NCBI-ProteinID:
XP_034373843
LinkDB
All DBs
Position
14:70980814..71038099
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVY
LATIADSNQNMQSLLPAPPTQNLPMGPGGMSQSGPPPPPRSHSMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYSMPPGGAQHYQGQQAPMGLMGQVNQ
GSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEESSQHYYEGGNSQYGQQQDAYQGAPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcggggcaagggcgagatcacgcccgccgcc
atccagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaagggaaggcctcggagtgctctcagtatcagcagatattgcacacaaacctggtatac
cttgctacaatagcagactctaatcaaaatatgcagtccctcttaccagcaccgcccaca
cagaatctgcctatgggtcctggagggatgagtcagagtggccctccgccccctccccgg
tctcacagcatgccttcagatggaatggtgggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcagggacctggaccc
aatcagctcagcatgacaaacagctccatgaatatgccttcaagtagccacggctccatg
ggaggttacaaccattcagtgccatcgtcccagagcatgcccgtgcagaaccagatgaca
atgagtcaggggcagccaatgggaaactatggtcccagaccaaacatgaatatgcaacca
aatcaaggtcccatgatgcaccagcagcctccttctcagcagtacagcatgccacctgga
ggtgcacagcactaccaaggacagcaggcacccatggggctgatgggtcaagttaaccaa
ggcagtcacatgatgggccagagacagatgcctccctacagacctccgcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccccgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggaatcctcccaacat
tactacgaaggaggaaactcacagtatggccagcagcaagacgcttatcaaggagcgccc
ccacagcaagggtacccgccccagcagcagcagtacccggggcagcagggctacccaggg
cagcagcagggctacggtccttcccagggcggtccaggtcctcagtatcctaattatcct
cagggtcaaggtcagcagtatgggggctataggcctacacagccaggaccaccccagcca
ccccagcagaggccttatgggtacgaccagggacaatatgggaattaccagcagtaa
DBGET
integrated database retrieval system
