Arvicanthis niloticus (African grass rat): 117720143
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Entry
117720143 CDS
T08817
Symbol
Cdx1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117720143 (Cdx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117720143 (Cdx1)
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
117720143
NCBI-ProteinID:
XP_034374499
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Position
14:27884186..27900886
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AA seq
269 aa
AA seq
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MYVGYVLDKDSPVYPGPARPSSLGLGPPTYAPPGPAPAPPQYPDFAGYTHVEPAPAPPPT
WAAPFPAPKDDWAAAYGPGPAAPAASPAPLAFGPPPDFSPVPAPPGPGPGILAQSLGGPG
APSSPGAPRRTPYEWMRRSVAAAGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT
IRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQPPMPPTQLPLPLDGTPTPS
GPPLGSLCPTNAGLLGTPSPVPVKEEFLP
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggctatgtgctggacaaggactcccccgtgtacccgggccccgccaggcca
tccagcctcggcctgggccctccgacctacgcgccccccgggccggcgcctgcgcccccg
cagtaccccgacttcgcgggttacacgcacgtggaaccggcgcccgcgccccctccgacc
tgggctgcgcccttccctgcgcccaaggacgactgggcagctgcctatggcccgggcccc
gcggcccccgccgccagcccggccccgctggccttcgggccccctccggactttagcccg
gtgcccgcgcctcccgggcccgggcccggcatcctggcccagtccctcgggggtccgggc
gcaccgtcttcgccaggagcgccaaggcggacgccctacgaatggatgcggcgcagcgtg
gcggctgcaggcggcggtggcagcggtaagactcggaccaaggacaagtaccgtgtggtc
tatacagaccaccaacgcctagagctggaaaaggagtttcactacagccggtacatcacc
atccggcgcaagtcggagctggctgctaacctggggctcacagagaggcaggtaaagatc
tggttccagaaccgccgggccaaggagcgcaaagtaaacaagaagaaacagcagcagcag
cagccccctatgcctcccacacagctgcctctgcccctggatggcacccccacaccatca
gggccacccctgggtagtctatgccccaccaatgctggccttctgggcacaccctcgcca
gtgccagtcaaggaggagtttctaccttag
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