Arvicanthis niloticus (African grass rat): 117724479
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Entry
117724479 CDS
T08817
Symbol
Phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117724479 (Phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117724479 (Phf1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117724479 (Phf1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117724479 (Phf1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
117724479 (Phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
PHD_ash2p_like
Chromo
DUF4537
C1_1
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
117724479
NCBI-ProteinID:
XP_034380215
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All DBs
Position
20:complement(48151579..48156328)
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AA seq
559 aa
AA seq
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MAQLPRLSRLGAPSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVAPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKALDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARTPPPVELTEDEAPTSFPSGQGPGGGV
SRPLGKRRRSEPEPLRRRQKGKVEELGPPTAAHSRHGSREQRALQASVSPPPPSPNQSYQ
GSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGSSGDSEPPDRSPLELHVGFPTDIPKS
PSHSVTAPSSSAPALTPGLSRHSLSPSPLCRSLSPGTGGGVRGGVSYLSRGDPVRVLARR
VRPDGSVQYLVEWGGGGIF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctcccccggctgagccgtttgggtgccccctctctttgggatccagcttcc
cctgctcccacctcaggccccagacctcggctttgggagggtcaagatgtgctggccaga
tggactgatgggctgttgtacttgggtaccatcaaaaaggtggacagtgctcgggaggtg
tgcttggtccagtttgaggatgattcccagtttctggttctatggaaggacatcagccca
gctgccctccctggggaggagctgctctgctgtgtctgtcgctctgagaccgtggcccct
gggaaccggctggtcagctgtgagaagtgtcgccacgcttatcaccaggactgtcacgtt
cccagggccccagcccctggagaaggagagggtacatcctgggtgtgccgccagtgtgtc
tttgcaatcgccactaagaggggaggcgccctgaagaagggtccctatgcccgggccatg
ctgggcatgaagctctccctgccgtatggactaaaagcgctggattgggatgctgggcac
ttgagcaacagacagcagagctactgttactgtggaggccctggagagtggaacctgaag
atgttgcagtgccggagctgcctccagtggttccatgaggcctgcacccagtgtctgagc
aagcccctcctctacggagacagattctatgaatttgagtgctgtgtgtgccggggtggc
cctgagaaggtccggaggttacagcttcgctgggtggatgtggcccatcttgtcctctac
catctcagtgtttgctgtaagaagaaatacttcgattttgaccgagagatcctccccttc
acctctgagaattgggacagtctgctcctgggggagctctcggacacgcccaagggcgag
cgctcttccaagctcctctctgctcttaacagccacaaggaccgtttcatttcagggagg
gagattaaaaagaggaaatgcctttttggtctccatgctcggacccctcctcctgtggag
ctcactgaagatgaagcacccaccagcttcccttcagggcagggccctgggggaggggtc
tcacgtcccctggggaaacgacggaggtcggagccagaacccttgaggaggaggcagaaa
gggaaagtggaggaactggggccacccacagcagcgcacagtcggcatgggtcccgggag
cagagggccctgcaggcctcagtgtctccaccaccccccagccctaaccagagctaccag
ggcagcagcggctacaacttccggcccacagacgcccgctgtctgcccagcagccccatc
cggatgttcgcctccttccacccttctgccagcactgcagggtcctctggggacagtgaa
cccccagacaggtcacctctggaacttcacgttggcttccccacagacatccctaaaagc
ccttcccactcagtgactgccccgtcttcctcggccccagccctgaccccaggcctttcc
agacactcactatccccttctcccttgtgccgtagtttgtctccggggactgggggagga
gtccgaggtggggttagctacctgtcccgaggggaccctgttagggtccttgctcgaagg
gtgcggcctgacggctctgtgcagtacctagttgagtggggaggagggggcatcttctga
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