Arvicanthis niloticus (African grass rat): 117725051
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Entry
117725051 CDS
T08817
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117725051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117725051
03036 Chromosome and associated proteins [BR:
anu03036
]
117725051
Spliceosome [BR:
anu03041
]
Complex B
Other components
Prp19-related factors
117725051
Complex C
117725051
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117725051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
117725051
NCBI-ProteinID:
XP_034380895
LinkDB
All DBs
Position
21:29855101..29857185
Genome browser
AA seq
691 aa
AA seq
DB search
MVASTAAGKQQIPKVAKVKNKAPAEVQITAEQLLREAKERELELLLPPPQQKITDKEELE
DYKLRKRETFEDNIRKNGTAISNWIKYAQWEESLKEIQSARSIYERALDVNNRTIPLWLK
YAEMEMKNRQVNHARNIWDRAVTTLPRVDQFWYKYTHMEEMLNNPPGARQVFERWMEWQP
EEQAWHSYINFELRYKEVEKARTIYERFVLVHPAVKNWIKYARFEEKHAYFAQARRVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYRYALDRIPKQEAQELFKNYTLFEKK
FGDRRGIEDIIMSKRRFQYEEEVKADPHNYDAWFDYLHLVESDAEADTVREVYERAIANV
PPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELATSQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRK
FEDKFGTASDKERVDKLMPEKVKKRRKVQADDGSDAGWVEVYDYIFPEDAANQPNLKLLA
MAKLWKKQQQEREAAEQDPDKDIDESEASSF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggtggcctccacagcagccgggaaacagcagattcctaaagtggccaaggtgaaaaac
aaagcgcctgcagaggtacagataactgctgagcagcttctaagagaagctaaagaaaga
gaactcgagctcctcctgcctccacctcagcagaagatcacagacaaagaagaattagag
gattacaaactacggaaaagggagacttttgaagataacataagaaaaaatggaactgcg
attagcaactggataaaatatgcacaatgggaggaaagtctaaaggagattcaaagtgct
cgatccatatacgagcgtgctttagatgtcaacaaccggactattccactctggctgaaa
tatgcagaaatggaaatgaagaaccgccaggtcaaccatgcccgaaatatctgggaccgt
gccgtaacaactctgccacgagtcgaccagttctggtacaagtacacacacatggaggag
atgttgaacaatcctcctggtgctcggcaggtgtttgaacgctggatggaatggcagcct
gaggagcaggcctggcactcctatatcaacttcgagctgagatacaaagaggtggagaag
gcccgcaccatttatgaacgctttgtgctcgtgcaccctgctgtgaagaactggatcaag
tatgctcggtttgaagagaagcatgcttattttgctcaagctcggagagtctacgagaga
gcggttgagttttttggggatgagcatatggacgaacacctgtatgtggcctttgctaaa
tttgaggaaaaccagaaagaatttgaaagggtacgagttatctacagatatgccctggat
aggattccaaaacaagaagcccaagaactctttaaaaactataccctctttgagaagaag
tttggtgaccggaggggtatagaagatatcatcatgagcaagcggagattccagtatgaa
gaagaagtgaaggctgatccacacaattatgatgcatggtttgattatttacacttggtg
gaaagtgatgcagaagctgacactgtgcgggaagtctatgagagagccattgccaatgtg
ccacccatccaggagaagaggcactggaagcgctacatctacctctggattaactatgca
ctctatgaagagctggaggccaaggatcctgagaggacaagacaggtatatcaagcgtct
ttggaactcattcctcataaaaagttcacgtttgccaaaatgtggttatattacgcacag
tttgaaataaggcagaaaaatctgccatttgccagaagagctctgggaacttccataggc
aaatgtccaaagaacaagttattcaaaggttacatagaactggaactacagcttcgagaa
tttgacaggtgcagaaagctttatgaaaagtttttggaatttggacctgaaaattgtacg
tcatggattaagtttgcagaattagagacaatccttggtgatattgagagagctcgggca
atatatgaattagccaccagccagccacgcttggatatgccagaggtactttggaaatca
tatattgattttgagattgagcaggaagaaactgagagaacaagaaacctttaccgacag
ttgcttcagcgaacacagcacgtcaaggtatggattagttttgctcagtttgagttatct
tctgggaaagaagaaggaagtgtggctaaatgcagacagatttatgaagaagctaacaag
accatgagaaactgtgaggaaaaagaagagaggcttatgttgctggaatcctggcgaaag
tttgaagataaatttggaacagcatcagacaaggagagagtagacaaactcatgccagaa
aaggtcaagaagagaagaaaggtccaggccgacgatgggtctgatgccggatgggtagaa
gtctatgactacatctttccagaggatgctgccaaccagcctaacctcaagcttctggcg
atggccaagctttggaagaaacagcaacaggaaagagaagctgcggaacaggatccagat
aaggacattgatgagagcgaagcctcatctttttaa
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