Aneurinibacillus sp. XH2: ACH33_18235
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Entry
ACH33_18235 CDS
T04247
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
anx
Aneurinibacillus sp. XH2
Pathway
anx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACH33_18235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anx03400
]
ACH33_18235
Enzymes [BR:
anx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACH33_18235
DNA repair and recombination proteins [BR:
anx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACH33_18235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
CarD_TRCF_RID
Helicase_C
ResIII
MFD_D3
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AMA74519
UniProt:
A0A0X8D666
LinkDB
All DBs
Position
complement(3632234..3635791)
Genome browser
AA seq
1185 aa
AA seq
DB search
MQGLVERFKRDSEFEAIVESFEKGLREQLASGLSNSARQIFYAALYQKMEQPLVIVTHNM
FQAQKVYDDMSQLISPDELWLYPANEMVISEVSISSPETLSQRIEVLNALSAGKKGVLIV
PYAGVRRSVVPVDEWRQAQCSIKVGSEIELDSFLAKMVALGYERVEMVEARGEISVRGGI
IDIFPVYTANPVRIELFDAEVDSIRTFDISTQRSIENLSEVVIGPTREVFGDKAVFNRAA
ERLEEHMSRALPKVKDIQAREKILEKVGWEIEQLRQGHSFTGIYKYISFLYRTNETLIDY
MSCSPLVVIDEPSRIVEAAAQLEKDEAEWKTTLIQQGEFLPDIELSHSLEDIIAPKKWKI
LHASLFLRQVPKTNPQNVVNFNCKAMQNFHGQMNVLKTEMERWKKAKATVVFCAADEERA
RRLERVFHDYDIEADIILSPEKALESGRPVITLGNLQSGFELPMLHLVVITETEVFTQKQ
RKAAKTRKNLSNAERIKSYTELRVGDYVVHVNHGIGKYLGIETLKINGIHKDYLHIKYAG
NDKLYVPIEQIDQVQKYIGSEEKEPKVYKLGGSDWKKVKSKVRASVQDIAQDLIRLYAER
QQARGYAFSKDGEEMREFEAMFPYEETEDQLRAIREIKEDMEKPRPMDRLLCGDVGYGKT
EVAIRAAFKAVMDGKQVAVLVPTTILAQQHYETFRERFADYPVNIAVISRFRTRKEQNQT
IKGLKDGTVDIIIGTHRLLSKDVAFKDLGLLIVDEEQRFGVTHKEKLKKLKTNVDVLTLT
ATPIPRTLHMSMLGVRDLSIIETPPENRFPVQTYVMEYSGALVREAIERELAREGQVYFL
YNQVQGIEQMADQIRMLVPEARVVVAHGQMSETELESVMLSFLEGEADVLVSTTIIETGV
DIPNVNTLIVTNADRMGLSQLYQLRGRVGRSNRIAYAYFTYQRDKVLNEVAEKRLQAIKE
FTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIASVGFDLYSQMLKDAIEELKGEPKKEEE
VHPEINLTIDAFIPSDYIQDGKQKIEMYKKFAAVSSFEEIDELTEELEDRFGDIPQSVRN
LLLVSKLRVHARKHRIVEISQKGDTIQLVFHEDQSTKVDWGDLYEIKGPLLRRITPSRQG
QQVVVGIKVKGLNHEESIELVENFLMQFDELKKKQEGEAVADVAN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgcagggtctggtagaaagatttaagcgtgacagcgaattcgaggcgattgtggaaagc
ttcgaaaaagggttgcgcgaacagttagcatccgggttaagtaactcggcccgtcagata
ttttatgccgcactttatcagaaaatggagcaacctctggtaattgtgacgcacaatatg
ttccaggctcagaaagtatatgatgatatgagccagttgatttcccctgatgagctatgg
ctgtatccggctaatgaaatggttatctcagaagtatccatttctagcccggagacgctt
agccagcgaattgaagtattgaacgctctttccgcaggaaaaaaaggcgtgcttattgtt
ccatatgccggagtgcgccgttcggtcgtgcctgtagatgagtggaggcaagcccagtgt
tccattaaagttggaagcgaaattgaattggatagttttctagcaaagatggtagcgctt
ggatatgagcgggtagaaatggtagaagcgcgtggcgagattagcgttcgtgggggaatt
atcgatattttccccgtatacacggcaaatccggttcggatcgaattgtttgatgcggag
gttgactctatccggacatttgatatttccacccagcgttccattgaaaatttatccgaa
gtggttatcggcccaacccgggaggtctttggcgataaagcggtgtttaaccgagcggcg
gaaaggcttgaagagcatatgagccgtgcattgcccaaggtaaaagacattcaggcgaga
gagaaaattttggaaaaagtcggatgggagattgaacagcttcgtcagggtcattcattt
acgggaatctataaatatatttcttttctttatcggacaaatgaaacactgatagattat
atgtcatgttctccgcttgtcgtgattgatgagccttcccgtattgtagaggcggccgct
caattggaaaaagatgaagcagaatggaagacgacattaatacagcaaggggaatttctt
cctgatattgaattatctcattcactggaagacattattgcgccgaaaaaatggaagatt
cttcatgcctcactttttttgcgtcaggtgccgaaaacgaatccacagaacgttgtgaac
tttaactgtaaagcgatgcagaatttccacggtcagatgaatgtgcttaaaacggaaatg
gaacgttggaagaaagccaaggccaccgtagtattctgcgcggcagatgaagaacgggcg
cgccgtttggagcgcgtatttcatgactatgatattgaagcggatattatcctttcaccg
gaaaaagcgctggaaagtggaagaccggttattacccttggcaatctgcaaagcggattt
gaacttccgatgctgcacctcgtagtgattacagaaaccgaagtgtttacccagaagcag
cgcaaagcagcaaagacgcggaaaaatttgagcaatgctgagcgcattaaaagctacaca
gagcttcgggttggagattatgttgtgcacgtaaatcatggtatcggaaaatatttgggg
attgaaacgcttaaaattaatggtattcataaagattatcttcatattaaatatgctggc
aatgataagctatatgttccgattgaacaaatcgatcaggtacaaaagtacatcggcagt
gaagaaaaagagccgaaagtatacaaattgggcggaagtgattggaaaaaagttaagagt
aaagtccgcgcttctgtgcaggatattgcccaggacttgattcgtttgtatgcggagcgt
cagcaggcaagaggatacgcctttagcaaagatggagaagagatgcgtgaattcgaagcg
atgttcccttatgaggagacggaggatcagcttagggcgattcgtgaaattaaagaagat
atggagaagccgcgtcccatggatcgtttgctttgcggtgatgttggctatgggaaaaca
gaagtggctattcgcgccgcatttaaggccgtcatggatggaaaacaggtagctgtgctt
gttccaacgacgatcctcgctcagcaacattatgagacgttccgggaaagatttgccgat
tacccggttaacatcgcagttattagtcggttccgtacccggaaagagcagaaccagacg
atcaagggattaaaagacggaacggttgatattatcatcggtacgcatcgtttgttgtct
aaagacgtggcattcaaagatttaggcctgcttattgtcgatgaagaacagcgttttggt
gttacacacaaggaaaagttgaagaagttaaagacaaatgtggatgttttgacattgaca
gcgactccgattccgcgtacactgcacatgtcgatgcttggcgtgagggatctgtcgatc
attgagacgccgccggaaaaccgtttcccggtacagacatacgttatggaatacagcggt
gcgcttgtacgggaagccattgaacgcgaattagcgcgtgaaggacaggtttatttcctt
tataaccaagttcagggtattgaacagatggcagaccaaattcgcatgcttgttccggaa
gcgcgagtggtggttgcccatggtcagatgagtgaaacggaacttgaatctgtcatgttg
agttttttggagggcgaggccgatgtccttgtcagcacaaccattattgagacaggtgtg
gacattccaaatgtaaatacgcttattgtaacaaatgctgaccgtatgggactgtcacaa
ctgtatcagttgcgcgggcgtgtgggtcgctccaatcggattgcgtatgcatacttcaca
taccagcgtgataaggtgttgaatgaggttgcagaaaagcgtttgcaagcgattaaagag
tttacggaactaggctctgggtttaaaatcgcgatgcgtgacctgtctattcgtggcgcg
gggaacttgcttggagcggagcaacacggcttcattgcatccgttggttttgatttgtac
agtcagatgctgaaggatgcgattgaggaactgaaaggtgagccgaagaaagaggaagaa
gtgcatccggagattaatttgacgatcgatgcatttattccgtccgactatattcaggac
ggaaagcagaaaatcgagatgtacaagaagttcgcggccgtttcttcttttgaagaaatt
gatgaattaacagaagaactggaggatcgctttggtgatattccgcaaagcgttcggaat
ttgttgctggtgtccaaactgcgcgtgcatgcgagaaaacatcgtattgtggagatcagc
caaaagggagatacgattcaacttgtcttccacgaagatcagagtactaaagtggattgg
ggtgacctctacgaaattaaggggcctcttctgcggagaattacgccctcgcgtcaaggg
caacaggttgtggtcggcataaaggtcaaagggctaaatcatgaagaaagtattgagctt
gtggagaatttcctcatgcaattcgatgaattaaaaaagaaacaagaaggcgaggcagta
gctgatgtggccaactaa
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