Amphiprion ocellaris (clown anemonefish): 111564222
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Entry
111564222 CDS
T06018
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
3.6.4.13
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111564222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111564222
03009 Ribosome biogenesis [BR:
aoce03009
]
111564222
Spliceosome [BR:
aoce03041
]
Complex A
U1 snRNP components
U1 related factors
111564222
Complex B
111564222
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-60S particles
Helicases
111564222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
111564222
NCBI-ProteinID:
XP_023119446
Ensembl:
ENSAOCG00000010337
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDATRRPIQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAVVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSSYRDRDSDRGFGGGPKSAFGGSKAQNGG
SYGGNSGNSSGSYGNNNYSNSNGQGNFGAPANQVGAFGNQSFQGPPQFGAMQRAAQNGMN
HPPFPFNSQPPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggttttcagacagagaccgtggcagagatagagggtatggtggcgggccccct
cgttttggaggtggtggcggaggcaacaggggtggacctcctccaggaaaatttggcaac
cctggtgagaggctgcgaaagaagcactggaaccttgatgagcttccgaagtttcaaaag
aacttctaccaggaacacccagatgcaacacgcagaccaattcaagaggttgaacagtac
cgaagaagcaaagaagtgactgttaaaggcagagactgccccaaacccattgtaaaattc
catgaagctgcatttccaagctacgtcatggatgttattgtcaaacagaactggactgaa
ccaactccaatccagtctcaggggtggcctgttgccctgagtggcaaagacatggttggc
attgctcaaactggttctgggaaaactcttgcataccttctgcctgcagttgtgcacatc
caacatcagccattcttggagcatggagatggaccgatttgcttggtgctggcaccaacc
cgcgagctggcccagcaggtgcaacaagtggctgctgagtacggccgggcctcccgtctc
aagagtacctgcatctatggtggtgcacccaaaggacctcaaatcagggaccttgagagg
ggggttgagatttgcattgctactccaggccgtctcattgattttctggaatgtggcaag
acgaatttgcgtcgttgcacttacctggtgctggatgaagctgaccgcatgctggacatg
ggatttgaacctcagatccgtaagatagtggaacaaattcggccagaccgtcagaccctg
atgtggagcgccacctggcccaaggaggtacgtcagctggctgaggacttcctgaaggac
tatgtccagatcaacatcggtgcactgcagctcagtgccaaccacaatatcctgcagata
gtagatgtttgcaatgacatggaaaaggaagacaaactgatccgtttgctggaggagata
atgagtgaaaaggagaacaagaccattatttttgtggagaccaaaagacgttgtgatgaa
ctcaccaggaggatgagaagggatgggtggccagcaatgggaatccatggagacaagagc
cagcaggagagggactgggtccttaatgagttcagatatggtaaagctccaattctcatc
gcaacagatgtggcctcccggggcttagatgtggaggatgtcaaatttgtcatcaattat
gactaccctaactcctctgaggattatatccaccgcattggacgcacagcccgaagtcaa
aaaacgggcacggcttacaccttcttcacccccaacaacatgaaacaagccagtgacttg
atctctgtgctccgcgaggccaaccaggccattaaccccaagctgatccagatggcagag
gacagaggaggtcgtggacgggggggaagaggtggctacaaggatgaccgccgggatagg
tattctgggggtgggaggagtaattttggtggtagtagctacagggacagggacagtgat
agagggtttggaggtgggccaaagagtgcctttggtggcagtaaggcccaaaatggtggc
agctatggaggcaacagtggcaactctagtggtagctatggcaacaacaactatagcaac
agcaatggacagggtaatttcggcgctccagcaaaccaggtgggtgcctttggtaaccaa
agcttccagggcccccctcagtttggggccatgcagagggccgctcagaacggcatgaac
cacccgccgttcccgttcaactctcagccaccgccaccacaggcccaacagcctccaccc
ccaccaccgatggtgccctaccccatgccaccacccttcccacagtag
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