Amphiprion ocellaris (clown anemonefish): 111569523
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Entry
111569523 CDS
T06018
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04510
Focal adhesion
aoce04518
Integrin signaling
aoce04540
Gap junction
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111569523 (pdgfrb)
04020 Calcium signaling pathway
111569523 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
111569523 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111569523 (pdgfrb)
04540 Gap junction
111569523 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
111569523 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aoce01001
]
111569523 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aoce04090
]
111569523 (pdgfrb)
Enzymes [BR:
aoce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111569523 (pdgfrb)
Protein kinases [BR:
aoce01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111569523 (pdgfrb)
CD molecules [BR:
aoce04090
]
Proteins
111569523 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Beta-prop_CGLA
PKD
C2-set_2
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
111569523
NCBI-ProteinID:
XP_023127456
Ensembl:
ENSAOCG00000000405
LinkDB
All DBs
Position
13:20292420..20325223
Genome browser
AA seq
1106 aa
AA seq
DB search
MRRVTGSTLHLTVTFTALLCFCTELFCLEITPDDKELVLAEGSSVSLTCSGSGDTTWEFK
RDDVPYFQVEQVQNARQSYQVVQTGTTSSVLTLWNVSWKHTGVYQCIDRLTGETKEVAVF
VPDPDLWFIESSHGMVTKTSEESTIPCVVTNPNISVTLYERDTELPIRGLYVPSEGFKAP
LEDRTYVCRGELNGEVKDSQAFYVFSIVVPEALGVYINASRTILKQGETLTVNCTVHGVE
IATFSWDVPGGDVNKIEPLTDYLSSTSMRSCLIYPRAWLAQGGNFVCNVHEGVQDQTASA
SINITVLERGFVDVKPAQHQNISAKLQENVELRVEIEAYPPPRIRWTKDGTTIKGDKIIA
IRQEHEIRYVTVLTLVRVRTEQKGLYTVLVTNEDDTKQVTFDLEVQVPSQIKDLTDHHLP
GKRHLVTCVAEGVPTPTIKWYSCDSMLKCSNQTAVWQPLTPEPEVLSIQTNVSYSQSRKT
SQVRSQVTFQKPQQVTVRCETNNTAGLVDRRDIKLVSSTLYSQVAVLAAVLALVVIMIMS
IIILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGS
GAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLITEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISRGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSVYVPMQEQIDTIKYADIQSSPYESPYQQDLYQEQGENRLD
LVISDSPSLTYDDLLGFSYQVAQGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NELFYSALKRGYRMAKPAHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLADTYKKR
YSQVNDNFLKSDHPAVARTKPRLSSPFPIASPVFSSPAPITLFSSPPDLYSQSLRPGDFR
REVEAQEVMASYNEYIIPIPDPKPEEVFTDVPSESPASSLVLEEETDSMSQDTADTLPEE
ERLEDTSERDALLGSSGTPEVEDSFL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgacaggatccacgcttcacctgacagttacatttacagctctcctgtgt
ttctgcactgaactgttctgcctggagatcacacctgatgacaaagagctggtcctggct
gagggctcctctgtcagcctcacctgctctggctctggggacacgacctgggagtttaag
agagatgatgtgccgtactttcaagtggaacaagttcaaaacgcccgtcaaagctaccaa
gtcgtgcaaactggcacaacgtccagcgttctgaccttgtggaacgtgagctggaagcac
acaggcgtctatcagtgcatcgatcgactcactggagaaactaaggaggtggctgtgttt
gttccagaccctgacttgtggttcatagagagctcccacggcatggtaacgaagaccagt
gaggagagcaccatcccctgcgtggtcaccaacccaaacatcagtgtcaccctgtatgag
agggacaccgagctgcccatcagggggctgtatgttcccagtgagggtttcaaggcaccg
ctggaagacaggacgtatgtgtgccgtggagagctgaacggggaagtgaaagactctcag
gccttctacgtcttcagcattgtcgtcccagaggccctgggcgtctacatcaatgcctca
aggacgatcctgaagcagggagaaacgctgacagtaaactgcacggtgcacggagtggaa
atcgcaactttttcttgggatgtccccggtggagacgtaaacaagatcgagccgctgaca
gactacctgtcctccacgagcatgcgttcctgcctcatctaccctcgtgcctggttggcc
cagggtggaaactttgtctgcaatgtccacgagggagtccaagatcagacggcctctgcc
agcatcaacatcaccgtgctcgaaagaggatttgtggacgtgaaacctgctcagcatcaa
aatatttcagccaagctccaagagaacgtggagctgagagtggagatcgaggcctaccct
cctcctcggattcgctggaccaaagatggcaccaccatcaagggagacaaaatcattgca
atcagacaagagcatgaaataaggtacgtcactgtgctcaccttggtgagggtgaggact
gagcagaaaggtctctacactgtccttgttaccaatgaagacgacacaaagcaagtgacc
tttgacttggaagtccaagttccctcccagattaaagacctgaccgaccaccatctccca
gggaagagacacttggtgacctgtgtagctgagggggtcccaaccccgaccatcaagtgg
tacagctgtgacagcatgctcaagtgcagcaaccagacggctgtttggcagccgctgacg
ccagagccggaggttctgagcatccagaccaatgtgagctacagccagtcacgaaaaacc
agccaggtgcgcagccaggtgaccttccagaagccccagcaggtgacagttcgctgtgag
accaacaacacagcagggctcgtcgacagaagagacatcaaactggtgtccagcactctg
tactcccaggtggcagtattggctgctgttctcgccttagtggtcatcatgatcatgtct
atcatcatcctcatcgctgtatggaggaagaaacctcgctacgagatcagatggaaagtg
atcgagtctgtgagtcaggacggacatgagtacatctatgtggaccccatccaccttccc
tatgatctggcctgggaaatgccccgagacaacctggtgctgggtcgcactcttggatca
ggagcatttggcagagtggtcgaggcaactgcttacggtctcacacattcccagtccagc
acaaaagtggcagtgaaaatgttgaaatctacagccaggaggagcgagactcaggcactc
atgtcagagctgaagatcatgagtcaccttggtcctcacctcaacatcgtgaacttgctg
ggagcgtgcaccaaacatggccctctgtacttgataaccgagtactgtcgctatggcgac
ctggtggactacctgcacaggaacaagcacaccttcctgcagtattacgctgagaagaac
caagatgacggctgcctcatctccagaggaagcacccctctgagtcagagaaaggggtat
gtctctttcggaagtgagagtgatggaggatacatggacatgagcaaagacgagccctca
gtctacgtccccatgcaggagcagatagacaccatcaaatatgcagacatccagtcctct
ccatacgagtccccctaccagcaggacctctatcaggaacaaggtgaaaacagattggac
ctggtgatcagtgactctcccagtctcacctacgatgatcttttgggtttcagctaccaa
gtggcacaggggatggagttcctcgcctccaagaattgtgtccatcgagatctggctgcc
aggaacgtgttgatctgtgagggcaagctggtgaagatttgtgactttggccttgcgaga
gacatcatgcatgattccaattacatctctaaaggcagcaccttcctgcctctaaagtgg
atggcaccagaaagtattttccataatctgtacaccaccctgagtgatgtgtggtcatac
ggcattcttctttgggagattttcacactaggaggaaccccgtaccctgatttgcccatg
aatgaactattctacagtgctttgaagagaggctaccgaatggccaaacctgcccatgcc
tctgatgaagtttatgaaatcatgaagaagtgctgggatgaaaagtttgagaagaggcct
gagttctccttcctggtccacagtgtggggaacatgctggctgacacctataaaaagaga
tacagccaagtgaacgacaacttcctgaagagtgatcaccccgcagtcgctcgcaccaaa
cccagactctcctcgccctttcccattgccagcccagtcttcagctccccagctcccatt
accctgttctcctcccccccggatctctacagccagagcctgaggcccggagacttcagg
cgtgaggtggaggcacaggaggtcatggcttcatacaacgagtacatcattcccatccca
gacccgaagccagaggaggttttcactgatgtaccgtcagaaagccctgcaagttccctg
gttctggaggaggaaactgactccatgtctcaggacacggctgacacgcttccagaggag
gaaagactggaggacaccagcgagagagacgctctgctgggttcctccgggacgcccgag
gtagaagacagcttcctgtag
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integrated database retrieval system
