Amphiprion ocellaris (clown anemonefish): 111570263
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Entry
111570263 CDS
T06018
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111570263 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111570263 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111570263 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111570263 (col9a2)
Proteoglycans [BR:
aoce00535
]
Extracellular matrix (ECM) proteoglycans
Others
111570263 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
111570263
NCBI-ProteinID:
XP_023128690
Ensembl:
ENSAOCG00000021596
LinkDB
All DBs
Position
15:complement(14209835..14227490)
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AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQTLCLALAQVRGPPGPQGQPGPPGPSGTPGSDGIDGDKGPPGPPGP
PGLKGEPGEPGPDGPPGENGIDGLIGAKGDRGPIGSPGPKGQPGPSGEPGPPGSGLPGLA
GAPGPIGLPGEIGPNGAKGVMGPPGPPGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKVGPRGEIGISGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGVKGGPGHAGMPGPPGPQGAAGLPGSPGAKGGAGAKGEPGPRGHI
GMAGASGPLGEPGLPGEPGMEGVPGPKGDRGQRGAVGPQGVVGKPGGKGERGPIGVPGAQ
GLSGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDTGHNGPT
GDPGKPGDLGPPGLPGPRGLNGERGVPGMPGIQGSAGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGAPGPQGLHGLPGARGIPGIIGAPGQIGNTGLKGKR
GAKGERGNPGQPHPGPPGPPGIQGPPGVDGVARDGRPGERGPQGSAGEAGRPGKAGSSGL
PGFCEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtgatactgcagaccttgtgcctggct
ctggcccaagtgaggggtccacctggacctcagggccagccaggcccaccaggcccctct
ggcactcctgggtcagatggcattgatggagacaaaggacctccaggcccccctggtcca
ccagggttgaaaggagagccaggagagccaggtcctgacggtccaccaggggagaatggc
attgatggtttgattggagcaaaaggtgatcgaggtcccatcgggagccctggcccaaag
ggtcaacccggtccaagtggtgagcccggacctcctgggtccggtcttccgggtctggct
ggcgctccagggccaattggtcttcctggtgaaatcgggccaaatggagcaaagggtgtc
atgggaccacctggacctccagggcttcctggacctcctggcaagccaggtcctccagga
aagttcattggtggagaggagggcagtgcagacttccagtgtcctcttaactgtccagca
ggacctaaaggcccccagggactacagggagtcaagggacacaaaggacgtgctggtgtt
ctcggagagcctggtagcataggaaaagtgggccccaggggagaaataggcatctctggg
gaacaaggcatcccaggacctccgggtccaatgggtctcagaggttatccagggatgatg
ggtcccaaaggagaggcaggccctcgtggttacaagggcatcaatggacctgtaggaatt
cccggtcctcctggtgaggagggacctcagggaccacccggagaggcaggagacaaggga
gacaaaggcagtcgaggtatccagggcccacagggtgcagttggcaaaaagggagagaat
ggtctgccgggtattgatgggaaagatggcacacctggtattcctggagtcaagggtggc
cctgggcatgctgggatgcctggtcctcctggtcctcagggagcagcaggattacctggc
agccctggggcgaagggtggagctggagctaagggagaacctggacctaggggtcatatc
ggcatggctggtgcctcgggacctttgggtgagcctggtcttcctggtgagcctggtatg
gaaggagtccctggacccaagggtgacagaggccagcggggcgcagttgggccacaggga
gtcgtcggcaagcctggaggcaaaggagagagaggccccattggtgtcccaggtgcccag
ggtcttagtggaactaaaggagacaagggcttccaaggaaaagttggttcaaaaggggac
gttggtgaccctggcgttgagggattggctggcgagaaaggtgaaaagggtttgtctggt
gaacctgggcccaaaggacagcaaggaattaggggtgacactggacacaatggacccact
ggagatcctggtaaaccgggagacctgggaccaccagggctacctggtcctagggggctt
aacggagagcgaggagtacctggcatgccaggcattcagggatcagcaggacgtgatgca
tctgaccagcatattattgaagtggtgctgaagatgttgcaggagaggctagcagcagtg
gcagtgagcgccaagagggctgtgcttggtggtgcaggtgtaatgggacctcctgggccg
cctggacctccaggagcacctggccctcaggggttacatggcttacctggtgcacgtggc
atccctggtatcattggagcacccgggcagattggaaacacggggctgaaaggaaagaga
ggtgccaagggagagagaggcaatccaggtcaacctcacccaggaccaccaggaccccca
ggaatacaaggtcctcctggtgttgatggtgtggctcgggatggtaggcccggcgagaga
ggacctcagggatcagccggagaggctggtcgccccggtaaggcaggctcgtcaggtctc
ccaggcttctgtgaggcagcgatgtgtctggcagcatcagcatacacctcaccgagacta
caggaggcgggaactatcaaaggaccaaatgtttag
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