Amphiprion ocellaris (clown anemonefish): 111577327
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Entry
111577327 CDS
T06018
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111577327 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111577327 (exosc9)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111577327 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111577327
NCBI-ProteinID:
XP_023139322
Ensembl:
ENSAOCG00000023602
LinkDB
All DBs
Position
4:complement(33305631..33312715)
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AA seq
427 aa
AA seq
DB search
MKDTPLSNCERDFLLRAIEEKKRLDGRQTYDYRRIKITFGTDYGCCFVDLGKTRVMAQVS
CELVAPKENRPNEGIMFFNIELSPMASPAFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGKTVWQIRVDIHMLNNDGNLMDASSIAAITALCHFRRPDVGIQGEEVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELISKALLNDKAARKAGGRCGFAESMPQERITALKTEE
TPMEMKDVTERANDIIQKAEAPPPAVSSPVVPVPGVGQVGQQNTWGLEEEDEEDEEEDGE
EQKETVAKMEEDQHEMEDRGAGDVVEISDSEEEEVVILHPEIPGKAENTGSGSHQQGAAT
SQKRQKK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtctaactgtgagagagactttttactgagagccatcgaagag
aagaagcggctcgatggacggcagacctacgactacaggaggataaagatcacattcggg
accgactatggatgctgcttcgtggatctgggaaaaaccagggtcatggctcaggtgtcg
tgtgagctggtggctcctaaagagaaccgacccaacgagggaatcatgttcttcaacatc
gaactgtcgccgatggcctcaccggcgttcgaacagggaagacagtctgagctgtcagtg
aaactcaaccgacagctggaaagatgcctgagaaactccaagtgcatcgatacagagtcc
ctgtgtgtggtgtcgggaaaaacggtgtggcagatcagagtggacattcacatgctgaat
aacgacgggaacctgatggacgcctccagcatcgccgccatcaccgctctgtgccacttc
agacgccccgacgtcggcatccagggagaggaagtgacagtgtacagtccagaggagaga
gaccccatccctctgagcatctaccacatgcccatcagtgtcagcttctccttcttccaa
caagggacttacctgctggtggacccgtgtgagcgagaagagcgagtgatggacggatta
ctgatgatcgccatgaacaaacacagagaaatctgctccatccagtccagcggcggcatc
atgctgctcaaagagcaggtaatgagatgcagtaaaattgcgagcgtcaaagtgtctgaa
atcacggagctcatcagtaaagcgctgctgaacgacaaggcggccaggaaggcaggtggg
agatgtggttttgccgagtcgatgcctcaggagcgaatcacggctctgaaaaccgaagag
actcccatggagatgaaagacgtgacggaaagagccaatgacatcatccagaaagccgaa
gccccgcctccggcggtttcgtcccctgtggtgccagtcccaggtgtcgggcaggtgggg
cagcagaacacctggggactggaggaggaagatgaagaggatgaagaggaggatggtgaa
gagcagaaggagacagtagcaaagatggaggaggatcagcatgaaatggaggacagagga
gcaggagatgtggttgagatatcagacagtgaagaagaggaggtggtcatacttcatcca
gagataccaggcaaagcagaaaatacaggctctggttctcaccagcagggggcagcaaca
tcccagaaaaggcagaaaaagtga
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