Amphiprion ocellaris (clown anemonefish): 111578370
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Entry
111578370 CDS
T06018
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
111578370
NCBI-ProteinID:
XP_023140900
Ensembl:
ENSAOCG00000003944
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Position
15:10106312..10133805
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AA seq
1163 aa
AA seq
DB search
MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKTTFEGE
KLKELTEGESDVISDVINPNGLPVQNGLDVDVKEFGRPPGNMPAPGPESDLLGGPGGVGA
EGLTPLGGGGGPKPPEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSAPTVGLFDYT
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQPHIGLAPAFVPNPYIISAAPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANSSANQQAAGQGQQNQQQVMRA
GGSQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGARSGPVRLMAPASVIISPSAAQAVAAAAASAGGANGGLGGGANGPFRAMTSQQPQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSAQPGPGSASLGFSQPASSSLGATLGAT
LGGFGTAVANSSGGSGSRRDSLTGNSELYKRTPSSLTPIGHGGFYNGTLGFSPSPGPVGM
PLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAPGAEAKYRSAASSGSSLF
SPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRF
IQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHV
LSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQP
HALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGN
YVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAVLIDEVCS
LTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAK
LEKYYMKNGVDLGPLCGPPNGIM
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaactgggcagacccctcaggccacaccccccagccagcagggtgtggcgggcgctgga
cgttcccaggatgatgccatggtagactatttctttcagcggcagcatggcgaacagccc
ggcaaacatcgctggcccactggagacaacatccatgatagccaggtgcgatccatggat
gagctgaaccatgacttccaggctctggctctggagggacgcgctatgggagagcagctg
ctaactggtaagaagttctgggagacagatgactctgggaaagatggaccaaaagggatc
ttcctggaccagtggagggacagtgcatggggcgcctcagatcactcagtgtctcagcca
atcatggtgtcccgtcgaccagggcagggtttccatggcggaggtgaagttggggtgggc
tctgtgatgtcaccgcggtctgagagcggagggttaggagttagcatggtagagtatgtt
ctctcctcctcgccggctgacaaactggattcctgcctccgaaaaggaccctatggacag
agggatggagaggtggaggaggagaagagggagaagccaaagacgacatttgaaggagag
aaactaaaagagttaacagaaggtgaatctgatgtgattagcgacgtcatcaaccccaat
gggctgccagtacagaacggcctcgacgtcgacgtcaaagagtttggtcgtcccccaggc
aacatgccggctcctggccctgagagtgacctgctgggaggtcctgggggtgtaggggct
gagggcttgacacccctgggaggtggtggaggccccaaacctcctgaggacttctctggt
gtggaacagggtggtgttaccatggaccccatggagtcggtgatggagccacttcagttt
gactacaactctcagatgcccatggactctgcacccactgtgggtttatttgattacact
aaccagcaacagctgtttcagagaaacaacgccctagcagtgcagcagttaacagcagcc
cagcaacagcagtacgcgttggcagctgcacagcagcctcacattggtctggccccagca
tttgtgcccaatccttacatcatcagtgcggctccaccagggacagacccctacgcagcg
ggactagcagcagcagctacacttgggccagcagtgatgcctcctcagtactacggtgtg
accccctggggggtctatcctgccaaccttttccagcagcaagctgctgcagccaacagc
tcggccaatcagcaggcggcaggccagggccagcagaaccaacagcaggtgatgcgtgct
ggaggaagccagcggcctttgacccccagccaaggtcagcagggtcaacagaatgaccag
ctggttgcagcagcagcagtcaactcagcccttgcctttggccaggggttagcagcagga
gtccctgggtacccagtcttagcgcctgcagcctactatgatcagacaggggccctggtg
gtcaacactggagccaggagtggccctgtccgcctcatggcccctgcctctgtcatcata
tctccttctgcagcccaagcagttgcagcagcagcagcctctgcaggtggtgccaacggt
ggtctaggtgggggtgctaatggtcccttccgtgccatgacatcccagcagcctcagcag
cagggtggccctggtggggctctgggaggaagctccttctatggatcctcgtccctcagc
tcttcttcccagagctcctctcttttctcacaaggctctgcccagcctggaccagggtct
gcctccctgggcttcagccagcctgcctcatcctcccttggtgccactctcggggccact
ctgggaggctttggcactgcagtggccaactcgagtggtggcagcggttccagacgggac
tccctgacaggcaacagtgagctgtacaaacgcacaccctccagtctcaccccgatcggc
cacggaggcttctataacggcaccttgggcttcagtccatcccctggccctgtgggcatg
cctctacccaatcaggggccctcccattccctcactcctccaccctccctgtccaatcac
agctcctcatccaacctcaatcttggaggcctgaccaatggcagcgggcgtttcatctct
gcagctccaggagcggaggccaagtaccgcagcgctgccagctcaggctcctccctcttc
tcacccagcagccagctgttcccgtcgtcacggctacgctatggcatgtcagacgtgatg
ccatcgggccggagccgcctgctggaggacttcaggaacaaccgctaccccaacttgcag
ctccgagacatcgctggccacatcatggagttcagccaggaccagcacggcagcaggttt
atccagttgaaattagagcgagcaagttcagcggagcgccagcttgtcttcagtgagata
ctccaggcggcctaccagctcatggtggatgtctttggaaattatgtcatccagaagttc
ttcgagtttggcagcctggaccagaagctggctctggcagagaggatccgaggtcacgtg
ctgtctctggccctgcagatgtacggctgcagggtcattcagaaagctctggagttcatc
ccctcagatcagcaggtcattagtgagatggtgcgggaactggacggccatgtgttgaag
tgtgtgaaggatcagaacggtaaccacgtggtgcagaagtgtatcgaatgtgtccagcct
cacgcactgcacttcatcattgacgcctttaagggacaggtctttgccctctccactcac
ccttatggctgccgagtcatccagcgcattctcgaacactgccttcctgaacagacgctg
cctattctcgaggagctccatcaacacacagagcagctagtgcaggaccagtatggcaac
tatgtgatccagcacgttttggagcacggtcgagctgaggataagagtaaaatagtggct
gagatcagaggcaatgtactgggactcagccagcacaaatttgccagtaatgtggtggag
aagtgtgtgacccacgcgtcacgggcagaacgggcagtactgatagatgaagtgtgcagc
ctgactgagggcccccacagtgccttatacaccatgatgaaggaccagtacgccaactac
gtggtgcagaaaatgattgatgtggccgagccaacgcagcgcaaaatcgtaatgcataag
atccggcctcacatctccaccctgaggaagtacacgtatggaaaacacatcctggccaag
ctggagaagtactacatgaagaacggcgttgacctgggtcccctctgtggccctcctaat
ggcatcatgtaa
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integrated database retrieval system
