Amphiprion ocellaris (clown anemonefish): 111580242
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Entry
111580242 CDS
T06018
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04260
Cardiac muscle contraction
aoce04261
Adrenergic signaling in cardiomyocytes
aoce04270
Vascular smooth muscle contraction
aoce04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111580242
04020 Calcium signaling pathway
111580242
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111580242
09153 Circulatory system
04260 Cardiac muscle contraction
111580242
04261 Adrenergic signaling in cardiomyocytes
111580242
04270 Vascular smooth muscle contraction
111580242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111580242
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111580242
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
111580242
NCBI-ProteinID:
XP_023143639
LinkDB
All DBs
Position
Unknown
AA seq
2104 aa
AA seq
DB search
MDAAKKDAPPGGDAGKSDTLGSTGSSRKRGGGAKKAMQANKSALRAPRALCCLTLSNPIR
MAALALVEWKPFDIFILLAIFANCVAMGVTKPYPDDDSNATNHQLEQVEYVFLVIFTIET
FTKILAYGLVMHPSAYIRSGWNLLDFIIVIVGLFSVIAEGMTDHKPGEAHHAAGKPGGLD
VKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGMLVMFVIIIYAIIGLELFIG
RMHKTCYFISTGLMVEDDPSPCAFAGSGRFCVGNGSECRGKWEGPNGGITNFDNIFFAML
TVFQCITMEGWTDVLYWMNDAIGYEIPWIYFVSLVIFGSFFIINLVLGVLSGEFSKEREK
AVARGELQKAQESKQMEEDMIGYMDWLIEAEDVDEEGNKRAAIAKKKMMKKFGWYKHSED
GGESDSDDDIAYLDDDNGFCASLMAKLMANSFCDQLCQLNHTFRKNCRVAVKTTNFYWLV
LLLVFLNTVASASEHYGQPKWLTEMQERANKILLLLFTLEMLMKMYAFGLQIYFMALFNR
FDCFVVCGGILETLLVELDVIPPIGISVLRCIRLLRIFKMTRHWAALSDLVNSLLNSMKA
ICSLLLLLFLFLIIFALLGMQLFGGKFNFDETQMKRSTFDSFPQALLTCFQILTGEDWNA
VMYDGIMAYGGPIFPNMVVCIYFVILFVCGNYILLNVFLAIAVDNLAGGGGKKKVEEKKE
EEEEWDEDEEKEDEDAGNEEDDWQENEELRAIEGLEGVAPLKPEFSGPKEKIVPIPDGSS
FFILGKKNCLRVACHNLIHHPYFTNFILIFIILSSISLAAEDPIKSHSFRNIVLGYADYV
FTSVFTVEIVLKVATAGTDKMKWKIMCYIKSVXSESSWQRNXFLTLFLCLLARVXMTVYG
AFLHTGSFCRNAFNLLDLLVVSVSLTSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLK
NVVQCVFVAIRTIGNILIVTTLLQFMFACIGVQLFKGRFYSCTDEAKHTPDECKGTFVVY
KDGDMNHPMVRERIWQNSDFNFDNVLMGMLALFTVSTFEGWPQLLYRAVDANAINRGPIY
NYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELNKNQRQCVYYALKA
QPIKIYIPKNPSQLKFWKIINSSQFEYVMFVLILGNTLTLAVQHYEQSKLFTSIMDILNM
IFTVVFTIEMIIKLLALRAHHYFIDPWNSFDALIVVGSVLDIAVSEFSGGGGHGEGGGKG
ESGKVSITFFRLFRVLRLVKLLSKGEGIRTLLWTFVKSLQALPYVGLLIAMIFFIYAVIG
MQTFGKVAIDDDTHINRNCNFQTFFMAVLVLFRCATGEQWQEIMLAALPGRRCDPESDTE
PGEEFSCGSNLSYIYFISFFMLCAYLIINLFIAVIMDNFEYLTRDWTVLGTHHLDEFKRV
WSDYDPEATGRIKHIDVVTMLRRIQPPLGFGKLCPHRVACKRLVAMNVPLHADGTVTFNA
TLFALVRTSLKIKTEGPIDQQNEELKLIIKKLWKRTKPKLIDEVIPPPRGDEVTCGKFYA
SFLIQDYFKKFRKRKERERKSKKKDKAASLQQGLRTLQDLAPEMRLAMACDLEEEEATEG
EMTADEIFDSGTSANTTPASTPMPRLDMLVEQTTVIVEPEPKISNGGVITEQVTGLQEHQ
RPGSDLAGLNIVTEQPVRSQPLPFRADSVTELPPPPPPEVSDGGEVGVEAPIVPAAEGVE
QVYNSEGDAASLASVDRYVYPEAVSPVPPETGYNVQSLERASSIGETPYDTHHNNGFVSN
GYSDTNMNGGSVGASPTPYATEAYNGNGYTGYNGNGSIISTNGNGSTMNGCNENGSAVSG
YNGNGYNGNENSDAQFVRRRLLPSIPKGRKPAFNFQCLRPQSSVDDLPIPGTYHGNTSPS
RSRLQTQHSLDSRPSSVSSMSSASWVNTTAAGATPVPGIIAPSGRRGKLIYTPMILVDGA
TGTSQPLWNDGSASLPAGRRPGWYPGQTRTFTSVRMPPPVSQGFVDKGSADSLVESILIS
EGLGIYARDPKFVNFAKREIAEACHMSLDDMENAAADLIARGASQSISRFEDELADEMNC
VISY
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcaaagaaagatgccccccctgggggagatgcaggcaaatcagacaccctg
gggtcaactggctcgtccagaaaaagaggagggggggccaagaaggcgatgcaggcaaac
aaatccgccctcagggccccccgagcgctgtgctgcctcactctgagcaaccccatccgc
atggcagcgctggccctagtggagtggaagccctttgatattttcattctactcgccatt
tttgccaactgtgttgccatgggtgtcaccaagccgtacccagacgatgattccaacgct
acaaaccaccaacttgaacaagttgagtatgtcttcctcgtcatcttcaccattgagact
ttcactaaaatcctcgcctacggcttagtcatgcaccccagcgcctacatacgcagcgga
tggaacttgcttgatttcattatcgtcatcgttgggttgttcagtgtgatagcggagggc
atgacggatcataagccaggagaggcccatcatgctgcaggaaaacccggaggcctggat
gtcaaagctctcagagcattcagggtgctgcgaccgcttcgacttgtatctggagtgcca
agtttgcagattgtgttgaactccatcatgaaagccatggttcctcttctccacattggt
atgctggtcatgtttgtcatcatcatctatgctatcatcggtttggagctttttatcggc
aggatgcacaaaacatgctacttcattagcacaggtctcatggtggaggacgatccgtct
ccttgtgcatttgctggaagtggccgcttttgtgtcggcaacgggtccgagtgcaggggc
aagtgggagggtcccaatggtgggatcacaaactttgacaacatcttctttgccatgctg
acagttttccagtgcatcaccatggagggttggaccgatgtgctttattggatgaatgat
gccattggctacgagattccgtggatttactttgtttctctggtcatcttcggatcattt
ttcattatcaatcttgtattgggtgtgttgagcggagagttctctaaggaaagagagaag
gctgtggctcgtggtgagctgcaaaaggctcaggagagcaagcaaatggaggaggacatg
ataggctacatggactggctcatagaggcagaggatgtggatgaagaaggaaacaaacgt
gctgcaattgcaaagaaaaagatgatgaagaagttcggctggtacaaacacagtgaggat
ggaggagagtcagactctgatgatgatatagcttatctcgatgatgacaacggcttctgc
gcttctctcatggcaaagttgatggccaatagcttctgtgaccagctgtgccagttgaac
cacactttcaggaagaactgccgcgttgcagtcaagaccacaaacttctactggctggtt
cttctgctggtgtttctcaacacagtggccagcgcctctgagcattacggacagccgaag
tggctcacggaaatgcaagagcgagccaataagatcctgctgctgctgttcactctggag
atgctgatgaagatgtacgccttcggtctgcagatctatttcatggcgctgttcaaccgc
tttgattgctttgtggtgtgtggtggcattctcgagacactgctggtggagttggatgtc
attccgcccatcggcatctctgtgctgcgctgcatccgactgctcaggatatttaagatg
actcgacactgggctgctctgtcagatctggtcaattcgctgctcaactccatgaaagct
atctgctcccttctgctcctgctcttcctcttcctcatcatcttcgccctgctggggatg
cagctgttcggaggcaaattcaactttgacgaaactcagatgaagagaagcacatttgat
tcgttccctcaggctctgctcacttgtttccagatcctcaccggagaggactggaacgct
gtgatgtatgacggcattatggcatacggagggccgatcttccctaacatggtcgtgtgc
atttattttgtcatcctctttgtctgcggtaactacatcctgctcaatgtcttcttggct
atcgctgtcgacaatttggcaggaggtggagggaagaaaaaagtcgaagagaaaaaggaa
gaggaagaagagtgggatgaggatgaagagaaagaggatgaagatgcagggaacgaggag
gatgactggcaggaaaacgaggagctgcgagccatcgagggactggagggcgttgctcca
ttaaaaccagagttctccgggcccaaagaaaagattgtaccaatacctgatggaagctcc
ttcttcattctcggaaagaaaaactgtttacgagtcgcctgccacaacctcatccatcat
ccctacttcaccaacttcatcctcatcttcatcatcctcagtagtatttcattggctgcc
gaggatcccataaaatcccactcattcagaaatattgtgctcggatatgccgattatgta
ttcacttcagttttcactgtggagatcgtactaaaggtagcaactgctggaactgacaaa
atgaagtggaaaataatgtgctatataaagagtgtgtagtccgaaagttcgtggcagcgc
aactagtttctaacgttgtttctttgcctccttgctcgtgtctagatgacagtctacgga
gcttttctgcacaccggctccttctgcagaaacgccttcaaccttctcgacctgctggtt
gtcagtgtgtcactcacatctttcttcctacactcaagtgcgatctctgtagtgaagatt
ctccgagtgcttcgagtgctcaggcctcttcgagccattaacagagcaaagggcctgaag
aatgtggtccagtgtgtgtttgtggcgatccgcaccatcggcaacatcctgattgtcaca
acgctccttcagttcatgtttgcttgtattggagtgcagctgttcaagggcagattctac
agctgcactgatgaagccaaacacactccagatgagtgcaagggaacttttgtggtctac
aaagacggagacatgaaccatcccatggttagagagcggatttggcaaaacagcgacttc
aactttgacaatgtgctgatgggcatgttggctttattcactgtgtcgacatttgaaggc
tggccacagctcctttaccgggctgtggatgccaatgccataaatcgaggccctatttac
aactaccgagtggaaatctccatctttttcatcatctacatcatcatcattgccttcttc
atgatgaacatatttgtgggttttgtcatcatcacatttcgagagcaaggagaagccgag
ttcaaaaactgtgaactcaacaaaaatcaacgtcagtgtgtgtattatgcactgaaagct
caacctataaagatttacatccccaaaaacccatcccagctcaaattctggaagattatc
aactccagtcagtttgagtacgtcatgtttgttcttattctgggaaacaccctcactctg
gctgttcagcattacgagcagtccaaactcttcacctccatcatggacatcctcaacatg
atcttcactgtggttttcaccatagagatgataatcaagttactggctctgcgggctcat
cactatttcatcgatccttggaattcatttgatgcgttgattgtcgtggggagcgtgttg
gacattgcagtctctgagtttagcggaggaggcggccacggtgagggtggcgggaaagga
gaaagtggaaaagtgtccatcacgttcttccgtttgttccgagtgttgaggttggttaaa
ctgctcagcaaaggagagggcattcgaactctcctctggacttttgtcaagtctctgcag
gctttaccttacgttggcctcctcatcgctatgatctttttcatctacgctgtgatcggc
atgcagacgtttgggaaagtggccattgatgacgacactcacatcaacagaaactgcaac
ttccagactttcttcatggctgttctagtgctttttaggtgtgccacaggagagcagtgg
caggagatcatgttggcagctctgcctggcagacgctgtgacccagaatctgacactgag
cctggtgaagagttcagctgtggtagcaacttgtcctacatctacttcatcagcttcttc
atgctctgtgcttacctgattatcaacttgttcattgctgttatcatggacaactttgaa
tatctaacaagagactggacagtgctggggactcaccatctggatgagttcaagagagtt
tggtctgactacgatccagaggccacaggtcgtataaaacacattgatgtggtcactatg
ctgcgcaggattcagcctcctcttggttttggaaaactatgtcctcatcgtgttgcttgc
aaaagactggtggctatgaatgtcccactgcatgctgatgggacagtcaccttcaacgcc
actctgtttgctctggtgcgaacttcactcaagatcaagactgaaggccccatcgaccag
cagaatgaagagctgaagctgattattaagaagctctggaaacgcacaaagcctaagctc
atcgatgaagtcattcctccccctagaggggatgaggtgacttgtgggaaattctatgcc
agcttcttgattcaagactattttaaaaagttccgcaagagaaaagagagggagaggaaa
tccaaaaagaaggacaaagctgcttctctgcagcaagggctgcggacgctgcaggacttg
gctccagagatgcgtttggcgatggcctgtgacctggaagaggaggaggccacagaagga
gagatgaccgccgatgaaatattcgacagtggaacttcagcgaacacgactcccgccagc
actccaatgcctcgtctagacatgctggtagagcagacgacggtgatcgtcgaaccagag
cccaagatctccaacgggggcgtgatcaccgagcaggtgacgggtttgcaggagcaccag
agaccaggatcagacctggcaggtctaaacattgtgacagagcagcctgtgaggtctcag
cctctgcccttcagagctgactctgtgactgagctgcctcctcctcctcctccagaagtg
tcagatggaggagaagttggagttgaagcaccaattgttccggctgcagaaggagttgag
caggtttacaacagtgaaggagatgctgcaagtctagcatcagtagacagatatgtgtat
ccagaggctgtctctcctgtaccacccgagacaggctataatgtccagagtctggaaagg
gcgagcagcattggagaaacaccttatgacactcatcataacaacggctttgtgagcaac
ggttacagcgacacgaacatgaacggtggaagtgttggcgcaagtcccactccctacgca
acagaagcatacaatgggaacggatacacaggctacaatgggaatggcagcatcatcagc
accaatggaaatggaagtacgatgaacggctgcaatgaaaatggcagcgctgtcagtggt
tacaacgggaacggctacaacggaaatgagaacagcgatgcgcagtttgtcaggagacga
ctgcttccttccatacccaaaggtcgtaagcctgcctttaacttccagtgtctgaggcca
cagagcagcgtggacgacctccccatcccaggaacctaccatgggaacacgtctccatcc
agatctcgtctacagacccagcacagtctggactcacggcccagcagcgtttcttcgatg
tcatccgcctcctgggtgaacacaacagcagctggcgccactcctgttccaggaataatt
gccccctcagggcgcaggggcaagctcatctacactcctatgatcctggtggacggagcc
accggtaccagtcagccgctgtggaatgacggatctgccagcctcccagcaggacgtcga
cccggctggtaccccggtcagaccaggaccttcacaagcgtcaggatgccgcctcctgtc
agccagggcttcgtagacaaaggcagcgcagacagtctggtggagtcgatcttgatctcc
gagggtctcggcatctacgctagggacccaaagtttgtgaactttgccaagcgggagatt
gcagaagcctgtcacatgagtctggatgacatggagaacgctgctgccgacctgatagca
cgaggagccagtcagtccatttcccgctttgaggacgagctggccgacgaaatgaactgt
gtgatttcttactga
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integrated database retrieval system
