Amphiprion ocellaris (clown anemonefish): 111582470
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Entry
111582470 CDS
T06018
Symbol
si:ch211-79m20.1
Name
(RefSeq) uncharacterized protein si:ch211-79m20.1
KO
K17386
platelet-derived growth factor subunit B
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04510
Focal adhesion
aoce04518
Integrin signaling
aoce04540
Gap junction
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111582470 (si:ch211-79m20.1)
04020 Calcium signaling pathway
111582470 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
111582470 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111582470 (si:ch211-79m20.1)
04540 Gap junction
111582470 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
111582470 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
aoce04052
]
111582470 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111582470 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
aoce04052
]
Cytokines
Growth factors (RTK binding)
111582470 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Growth factors/receptors
111582470 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
111582470
NCBI-ProteinID:
XP_023146919
Ensembl:
ENSAOCG00000008864
LinkDB
All DBs
Position
4:complement(38772251..38790350)
Genome browser
AA seq
570 aa
AA seq
DB search
MRSWFLLLLLAALLAAHLRLGGAEGDPLPASLVDLVRNSPISSVDDLKLLLQQETNATEE
DEDEHDVLTNHTHGRYIRSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFLLWPPCVE
VQRCSGCCNTRLLQCVPTVTSSRYLQVIKIQYINRKAHYDKAIISVEDHVTCRCQPPSST
SSSSSSSSSVPVPRSSTQSYPNPPPPPPQQPPLSSHLPLPRPVHPAPPKTHASKADLHRH
DDLKHNQQHFHPEEREPVARQWQQGSYTQLVHWTQPRVHQAPTQVQAGAHQTITGMLGSV
GSWPSEARAEHSVMGTTQQVGHGSGYDGSREETGVHVSNSGGEVHHPDHTQRQQQLLQHQ
QRQQYQQQYQYHHQPHYPQQYNHGGAEDQELRTQYRLNAAQSDSASPPVSPTQPSTLAEI
PTPLPTAQRDSVTGRKNTEVTHHKQTETATASQKEGNVREESGSANSGDSAGAEPANQGK
EKDSKVTSEDGRFTEEERRQKLLEMVQREPEKPTLLHPHHPQQRLKPTAVSTVAPMSASA
RQAPFRPASPRRRRKHRKRISKAAMRAMIM
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctggttcctgctgctgctgctggctgcgcttttagcggcccatctgcggctc
ggcggcgctgagggcgatccgctgcctgcatcactggtcgacctggtgaggaactctccc
atctcctccgtggacgacctgaagctgctgctgcagcaggagaccaacgcaacagaagaa
gatgaggacgagcatgacgttcttacaaaccacacccacggtcgatacattagaagtctt
gtggaggcgcagccggcccagcaggcggcatgtaaagttcgaacagaggtgatggaagta
acgagatccatgttggaccgccgaaacgccaacttcctgctgtggccgccatgcgtggag
gtgcagcgatgttcgggctgctgcaacaccagactgctccagtgtgttcccacagtcacc
tccagcagatacctgcaggtgataaagattcagtacataaacaggaaagcccactacgac
aaagccatcatctcagtggaagatcacgtcacctgcaggtgccagccgccctcatcgacc
tcttcgtcttcttcttcctcctcgtctgttcccgtccctcgctcctccacccagagctac
cccaatcctcctccacctccaccgcagcagcctcccctctcctcccacctcccccttccc
cgacccgttcaccctgctccacccaagactcacgcctccaaggctgacctccatcgccac
gacgacctgaagcacaaccagcagcatttccatcctgaggagcgtgagccggtggcgagg
cagtggcagcagggcagctacacccagcttgtgcactggacgcagcccagggtgcatcag
gcacccacacaggtgcaggcgggggcgcaccagacgatcaccgggatgctcgggtcggtc
ggcagctggccgtctgaagcgagggcagaacacagtgtcatgggaactacacagcaggtg
ggacatggcagcgggtatgacgggagcagagaggagactggtgtgcatgtgtcaaacagt
ggtggcgaagtgcatcatccggatcacacacagaggcagcagcagctgttgcagcatcag
cagaggcagcagtatcagcagcaatatcagtatcatcatcagccgcattatccacaacag
tacaaccacggaggggcagaggaccaagagctgaggacacagtatcgactcaacgctgcc
caatctgacagcgcctccccacctgtcagcccaacccaaccgtccacattagcagaaatc
cccacccctctccctactgctcagagagactcagtgaccggccgaaaaaatacagaggtc
acgcatcacaaacagactgagactgcaacagccagtcaaaaagaagggaatgtgagggag
gaaagtgggtcggccaatagcggggactcggctggggctgagccggccaatcaggggaag
gaaaaagactctaaagtgaccagtgaggatggtcgtttcacagaggaggagaggagacag
aaacttctggagatggtacagagggaaccggagaaaccgactctccttcatccacatcat
cctcagcaaagactaaagccaacagccgtctccactgtggctcccatgtcggcatcagcc
cgccaggccccgttcagacctgcttcgcctcgccgcaggagaaaacatcgcaaacgcatc
agcaaagcagccatgagagccatgatcatgtag
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