Amphiprion ocellaris (clown anemonefish): 111583826
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Entry
111583826 CDS
T06018
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111583826 (tsen54)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
111583826 (tsen54)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
OCIA
Motif
Other DBs
NCBI-GeneID:
111583826
NCBI-ProteinID:
XP_054861465
Ensembl:
ENSAOCG00000000152
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All DBs
Position
19:complement(17735387..17749569)
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AA seq
449 aa
AA seq
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MQVNVNVLFYCRGNLVKAVWIPSDQIVELQSPAGKFWQTMGFSANGKQYLLPEEALYLME
CGNVQVFYRDLPLSIQDGYERFLSSATVTLQQYQVFGHLKRLGYVVHRFDPSSEPSSYAR
QLNLPQSRDRAGRQLKRKRSPSPTATCSYTEAQVESTIEKMEEDKCSLEGDDAKKLAASP
DIQTATTSGADEGRSWWMTDDLGASDKELHHSPTSGSSRWDFSSIPFPDVGSSERHPSCL
APPEPSLLPGDLTVGVCDIASWRRKINLRMVKMSSKEQKREKDTRRRRWDVNKDREVRRC
RNWAEYHELLARRQRKRKGRPAHLWNREVTPLHDPKQPISTGELLDKISVIKSTHLLEGA
SRLKGSEQWRICFNVYQPDTVADFKKSNPGKPYSRMCVCSFDGPVPDLRAIKLLAFQSGD
IPVVFAVVDHGDISFYTFKDFQLPTDVFP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttaatgtgaatgtattattttactgcagaggaaacctcgtgaaggccgtatgg
attccaagtgaccagattgtggagcttcagtctcctgctggaaagttctggcagacgatg
ggcttttctgcaaatggcaaacagtatctccttccggaagaggctctctacctgatggag
tgtggaaatgtgcaggtgttttatagggacctgccgctttccattcaggatgggtatgag
agatttctgtcctccgccacagtgaccctccagcaatatcaggtgtttgggcatttgaag
agactcggctatgtggtgcacagatttgatcccagttctgagccttcgtcctacgcgagg
cagctgaacttgcctcagtcacgagacagagcagggagacagctgaagaggaaacgcagc
cccagtcccacagcaacgtgcagttataccgaagcacaagtggagtccaccattgagaaa
atggaagaggataaatgtagccttgaaggtgatgacgctaaaaaacttgcagcctctcca
gacatccagactgccaccacaagtggagcagatgaaggcaggagctggtggatgacggat
gaccttggggcctcagacaaagaattacatcatagccccacttctggctcctcacgctgg
gacttcagctccatcccattccctgatgtgggctccagtgagcgccaccccagctgcctg
gcccctccagaaccctccctgctgccgggggatttgactgtgggagtctgtgacattgcc
tcctggaggaggaaaataaacctgcggatggtgaagatgtcctcaaaggagcagaagagg
gaaaaggacacgcgcaggcgacggtgggatgtcaacaaagacagagaggttcggcggtgc
agaaactgggcagagtatcatgagctcctggcgaggcggcagaggaagcgtaaaggccga
ccagcacacttgtggaacagggaagttactccattacatgacccaaaacagccaatctcc
actggcgagctgttggacaaaatcagtgtgattaaatctacacatctgctcgagggagca
tccaggttaaaaggttcagagcagtggaggatttgtttcaatgtttaccagcctgatacg
gtggctgacttcaagaagagcaacccggggaaaccatactcccgcatgtgtgtgtgcagc
ttcgatggtcctgtacctgacctgagagcgatcaagctgctggccttccagagcggagac
atcccagtggtcttcgctgtggtggaccacggagacatatccttctacaccttcaaagac
ttccagctgcccactgatgtgttcccctga
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