Amphiprion ocellaris (clown anemonefish): 111586837
Help
Entry
111586837 CDS
T06018
Symbol
lmx1bb
Name
(RefSeq) LIM homeobox transcription factor 1, beta b isoform X2
KO
K09371
LIM homeobox transcription factor 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111586837 (lmx1bb)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
111586837 (lmx1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
TLP-20
Motif
Other DBs
NCBI-GeneID:
111586837
NCBI-ProteinID:
XP_023152529
Ensembl:
ENSAOCG00000020145
LinkDB
All DBs
Position
6:complement(17679701..17727345)
Genome browser
AA seq
376 aa
AA seq
DB search
MLDGIKIEDHPLRSGQATLGVMLGSECHHRSVCEGCQRPISDRFLMRVNDSSWHEECLQC
TVCQQPLTTSCYFRERKLYCKHDYQQLFATKCSGCMEKIAPTEFVMRALECVYHLNCFCC
CVCDRQLRKGDEFVLKEGQLLCKIDYEREKDLLSSVSPDDSDSEKSDDEELDIKPEKGIG
SQGKGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV
WFQNQRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRMEGMMNSFTPLAPPQQQLVAMDQN
GYSTDPFQQGLTPPQMPGDHMNPYGNDSAFHDIDSDTSLTSLSDCFMASSEVNSMQARVG
NPIDRLYSMQNSYFAS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctggacggcataaaaattgaagatcatcccctgcgatcgggacaagccacgctggga
gtcatgctcggctctgaatgtcatcatagatcggtgtgtgaaggatgccagcgtcccatc
tccgaccgcttcttgatgagagtcaacgattcctcatggcacgaagagtgtttgcagtgc
accgtgtgtcaacagcctctcaccaccagctgttacttcagagaaaggaaactttactgc
aaacacgactaccaacagctgtttgcgaccaaatgcagcggctgcatggagaaaatcgcc
cccacagagtttgtgatgcgggctctggagtgtgtctaccatctgaactgcttctgctgc
tgcgtgtgcgaccgccagctgaggaagggcgacgagtttgtcctgaaggagggtcagctg
ctctgcaagatcgactacgagagggagaaagacttactcagctccgtcagcccggatgac
tcagactcagagaaaagtgacgatgaggagttggacatcaagccagagaaaggcatagga
agccaggggaagggggatgatgggaaggatccaaggaggcctaaaagaccacgaaccatt
ctgaccactcagcagagacgggccttcaaggcctcctttgaggtgtcctcaaaaccctgc
agaaaggtgagggagacgctggctgctgagacaggactcagcgttcgggtggtccaggtg
tggtttcagaaccagagagctaagatgaagaagttggccagaagacagcagcaacaacaa
gaacaacagaattctcaaagacttggccaagaggtgatgtctaatcggatggaggggatg
atgaactccttcacacccctggctcctccgcagcagcagctggtcgccatggatcagaac
ggttacagcacagacccgttccaacaggggctcacccccccacagatgcccggggaccat
atgaacccatatggtaatgattccgcattccatgacatagacagcgacacgtctttaacc
agcctcagtgactgcttcatggcatcgtcggaagtcaactccatgcaggcccgcgtgggg
aaccccatcgaccgcctctactccatgcagaactcttattttgcatcatga
DBGET
integrated database retrieval system
