Alkaliphilus oremlandii: Clos_0521
Help
Entry
Clos_0521 CDS
T00607
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Clos_0521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoe03021
]
Clos_0521
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_0521
Enzymes [BR:
aoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Clos_0521
Transcription machinery [BR:
aoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Clos_0521
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Clos_0521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ABW18083
UniProt:
A8MLG9
LinkDB
All DBs
Position
573670..574623
Genome browser
AA seq
317 aa
AA seq
DB search
MIEIEMEKPKVEVVEINAENTYGKFTVEPLERGYGTTLGNSLRRIMLSSLPGAAVTSVKI
DGVLHEFSTIPGVKEDVAEIIINLKGLSIRMHGNEPKTVRIEAKGEGVITAGDIIADADV
EILSPDTHIATLDTDAVLNMELTIAKGRGYVPAENNKTPGMPIGVLPIDSIFTPVTKVSY
HVENTRVGQVTDYDKLVIEVFTDGSIVPDEAISLAAKIMNEHLNLFITLTDHVNDVEIMV
QKEEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVDELAQKSEEDMMKVRNLGRKSLEE
VQKKLEELGLGLRPSDE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaatggaaaaaccaaaggtagaggtcgtagagattaatgcggaaaat
acctatggtaaatttacagttgaaccactagaaagaggctatggaactactttaggaaac
tccctaagaaggatcatgctctcttcattacctggagccgcagtaacatctgtaaaaatt
gatggtgttctacatgaattttctacaataccaggtgtaaaggaagatgttgcagagatt
attattaatctaaaaggcttgtctattcgtatgcacggaaatgagcctaaaacggttcgt
atagaagcaaagggcgaaggtgtaattactgctggcgacatcattgcagatgcagatgtt
gaaattcttagccccgacacacatattgctactttagataccgatgcagttctaaatatg
gaactgaccatcgcaaaaggtagaggatatgttccagccgaaaacaacaaaacaccagga
atgccgattggtgtacttccaatagattcaatttttactccagtaacaaaggttagttac
catgttgaaaatactagagtaggtcaagttactgactacgataaattggttattgaagtg
ttcactgatggtagtattgtacctgatgaagctatatcactagctgcaaagataatgaat
gaacatttaaacctgtttattacattaacggatcatgtgaatgatgtagaaattatggtt
cagaaggaagaggataagaaagaaaaggttcttgaaatgaccatcgaagaactggatctt
tccgtaagatcctacaactgtctgaagcgtgcaggaattaatacagtggatgaacttgct
cagaaatctgaagaggatatgatgaaagttagaaacctcggaagaaaatcactggaagaa
gttcagaaaaagcttgaagagttaggtcttggattaagaccgagcgatgaatag
DBGET
integrated database retrieval system
