Asparagus officinalis (garden asparagus): 109833703
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Entry
109833703 CDS
T05243
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109833703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109833703
03012 Translation factors [BR:
aof03012
]
109833703
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109833703
Translation factors [BR:
aof03012
]
Eukaryotic type
Release factors
109833703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
17kDa_Anti_2
BMT5-like
Motif
Other DBs
NCBI-GeneID:
109833703
NCBI-ProteinID:
XP_020257069
LinkDB
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Position
3:complement(33270872..33278863)
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AA seq
437 aa
AA seq
DB search
MSDGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQTKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNSVTGEIVIKHLNKEQEADQSNFRD
AASNAELEVQEKISLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDGDVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatggtcatgaaactgataagaacattgagatatggaagattaagaagctgatc
aaggccctggagtctgcaagaggtaatggcactagcatgatctctcttattatgccacca
cgagatcaaatctctcgagttaccaagatgttgggcgatgaatatggaactgcttcaaac
atcaaaagtagagtgaaccgccagtctgttttgggtgcaatcacctcagctcaacagaga
ctgaaactctacaacaaggttcctcccaatggactggttctatacacaggaaccattgtt
acggatgatgggaaggagaaaaaggttacaatagattttgagcctttcaagcccatcaat
gcatctctttatctctgtgataacaagtttcacaccgaagcattaaatgaacttctggaa
tctgatgacaagtttggtttcatagttatggacggaaatggaacactttttgggacttta
agtggcaacacgagagagatactgcacaagttcactgtggatcttcccaagaagcacggt
agaggaggacaatcagcgcttcgattcgctcggcttcggatggagaagcgtcacaattat
gttaggaaaacagctgagctagcaacccagttcttcataaatccagcaacgagccagcca
aatgttgctggattaattcttgctggttcagccgatttcaagaccgagttgagccaatct
gacatgtttgatcaacgtcttcagaccaaaatactcaatgttgttgatgtttcttacgga
ggagaaaacggtttcaatcaagctattgagttatcggcagaaatactttcaaatgtgaag
tttatccaggaaaagaaattgattggaaaatattttgaggaaattagccaagacacaggc
aagtatgtctttggtgtggatgacacattaaaggctcttgaaatgggtgctgtcgagatt
ctaatagtctgggaaaacttggacatcaatagatatgtgcttaagaacagcgttacagga
gaaattgtcataaaacacttgaacaaagagcaggaagctgatcagagcaattttcgtgat
gcagcttctaatgctgaacttgaggtccaagagaagatctctttgctggagtggtttgcc
aatgagtacaagcgttttggttgttctcttgagtttgtcactaacaaatctcaagaaggt
tcacaattctgtagggggtttggtggcattggtggtattttgcgttatcagcttgatata
aggtcttttgatgagctatctgatgacggagatgtgtatgaagactctgattag
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