Asparagus officinalis (garden asparagus): 109835394
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Entry
109835394 CDS
T05243
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109835394
03029 Mitochondrial biogenesis [BR:
aof03029
]
109835394
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109835394
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109835394
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
109835394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_22
AAA_16
Viral_helicase1
UvrD_C_2
AAA_19
SLFN-g3_helicase
ResIII
AAA_11
BrxL_ATPase
PhoH
BrxC_BrxD
Herpes_Helicase
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
109835394
NCBI-ProteinID:
XP_020258959
LinkDB
All DBs
Position
3:complement(86180754..86182814)
Genome browser
AA seq
686 aa
AA seq
DB search
MCKKIKEGNKKKHEEDHEKELLYVEFPECYVWDSTAKSWSPRKQRQVIGRINGANPIEGE
RYYLRLLLTHVRCPKSFEDLLMVNDIHCKSFKQSAQKLGLLEFDDSIRECLDEAIVFQMP
TALRRLFATILVHYEPTDVNHLWDKYLESLAEDFSMKPNATRASVINDTLLNINFYLESM
GKDIKNFDLPPLQAKNITEEGSYPREIKEELDVQISTDDLNAATKLNYEQHTAYTTILTR
VEANKSGVFFIDGPGGTGKTYLYRALLATVRSQGMIALATATLGVVAVIMPGGRTAHSRF
KIKIPTTDSSMCNISKQDGTSKLLRIARLIIWDEAAMAKRVAIETLDRTLRDLMDQDEPF
GGKVIVFGGDFRQVLLVVPHSTRSQTIKESLVSSHLWRKMIKLQLSKNMRAKSDTSFSEF
LLRIGNGDEPTVTQDLIKLPNAMLIQNQSDELPEDSLINSIFPSLDENFKSIDYMKDRAI
LATKNKYVDMLNDRLIKRFPGEEKEFYSFDEADDDTNHHYQEEFLNTLLPNGLPPHKLML
KKYCPIILLRNLDPTNGLCNSTRMICQDFNYNVIQPKITIGQHVGKEVFLPRIPLSPAED
EGLPFKFKRKQFPIRLCFVMTINKSQGQTIPNVGIYLPEPVFSHGQLYVALSRGTSMMTT
KILITSDGKFAEEEQYTKNVVYKEVL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaaaaattaaagaaggtaacaagaagaaacatgaagaagaccatgaaaaggag
ttattatatgtggaatttcctgaatgttatgtttgggattcaacagcaaaatcttggagt
ccaagaaaacagagacaagtgataggtcgaataaatggggctaatccaattgaaggagag
agatattacttgcgactattgcttactcacgttaggtgtccgaaatcatttgaagatcta
ctgatggtaaatgatattcattgtaaatctttcaagcaatcagctcagaaattaggtctt
ttggaatttgatgatagcataagagagtgcttagatgaagccatcgtcttccaaatgcca
acagcacttcgacgtttgtttgctactatattggttcattatgaacctacagatgttaat
catttgtgggataaatatcttgaatcattagctgaagacttctcaatgaaaccaaatgct
actagagcttcggtgataaatgatactcttctcaatattaacttctacttagagagtatg
ggaaaggatattaaaaattttgatttgccacctttacaagcaaaaaacattacagaggaa
ggttcatacccaagagaaataaaagaagagttagatgtacaaatctcaactgatgatcta
aatgctgcaacaaaactcaactatgaacaacatactgcatacactacaatactaacaaga
gttgaagcaaataaaagtggagttttctttattgatggtccaggaggaactgggaagact
tatttatatcgtgctctacttgcaacagtaagatcgcaaggtatgatagctcttgctaca
gcgacattaggtgtcgtagctgtaataatgcctggtggaagaacagcacattccagattt
aaaatcaaaatcccaacaacagattcatctatgtgtaatatatcaaagcaagatgggaca
tcaaaactccttagaatagctcgtttaataatttgggatgaggctgctatggctaaacgc
gttgcaattgaaacgttggatagaacactaagagatttaatggatcaagatgaaccattt
ggcggaaaagtaattgtatttggtggtgattttagacaagttttactagtggtgcctcac
tcaacaagatcacaaactatcaaagaaagtttagtaagctcacatttatggagaaaaatg
atcaaactacaactttcaaaaaatatgagagcaaaatcagacacatcattcagtgaattt
cttcttaggattgggaatggagatgaaccaacagtgacacaggatctcataaaactgccg
aatgcaatgttgatccagaatcaaagtgatgagctaccggaagattcgctcataaattca
atttttccatctttagacgaaaatttcaagtctattgactatatgaaagatagagctatc
cttgcaacaaaaaataaatatgttgacatgttaaatgatagactaataaaaaggtttcca
ggagaagaaaaagaattctatagctttgatgaagcagatgatgacactaatcatcattac
caagaagaatttttgaacactctgctccctaatggactaccgccgcacaagctaatgttg
aaaaaatattgtccaattattttactaaggaacttggatccaactaatggactgtgcaac
agtacaagaatgatatgtcaagattttaactacaatgtaattcaacctaaaatcacaata
ggccaacatgttgggaaagaagttttcttgccaagaataccattgtcaccagcagaagat
gaaggattaccattcaagttcaaacgcaaacaatttcccataagattatgttttgtaatg
acaattaataaatcccaagggcaaacaatacctaacgttggtatttatctacctgaacca
gtgttctctcatgggcaattatatgttgctttatcgcggggtacttctatgatgacaacc
aagatcttaataacatcagatggaaaatttgcagaagaggaacaatacacaaaaaatgtt
gtatacaaggaagttctctag
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