Asparagus officinalis (garden asparagus): 109835975
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Entry
109835975 CDS
T05243
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109835975
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109835975
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109835975
NCBI-ProteinID:
XP_020259518
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Position
4:complement(60251164..60263683)
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AA seq
387 aa
AA seq
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MTNLSFFLLFFILLISHTNAGFNVVDYGATPDGETDSSGPFLRTWAAACAAFGQSNIVVP
KGRFYVSMGAFHGPCNSSSVNVHVFGSIVGHAVPQKTQTWLVFRYVDGLSIQRGAIDGHG
GEIWGCKLERNKDECPTGLTTLSINHCKNVLVNGLTFINSQLFHIAIFASEFVTIQNVKI
FAPEDSPNTDGIHVGMSNGITITNSYIKTGDDCISLGPGSTDVLIDRVYCGPGHGISIGS
LAERSHENAGVRNVTVKRVVIAGTDNGFRIKTFARDSEAFVDQVSFRHAVMRNVSNPIII
DQKYCSSKENCPQGDSGVKITNVKFENIRGTSATPVAIKVDCSATNPCTGIKLKDVDLKY
RDQIAKSFCRNAKGSLSGFVSPPIDCF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctctccttcttcctcctcttcttcatcctcctgatctcccatacaaacgca
ggcttcaacgtcgtagactacggagccacacccgatggcgagaccgactcctctgggcca
tttctccgcacatgggccgctgcatgcgctgcgttcggccaatcaaacattgtggtgccc
aaaggacggttctatgtgagcatgggagcctttcatgggccgtgcaatagtagttccgtg
aatgtgcacgtgtttggctccattgttgggcatgctgttccgcagaagacgcagacttgg
ttggtttttaggtatgttgatgggttgagtattcagagaggggccatcgacggccacggc
ggcgagatttgggggtgcaagttagaaaggaataaggatgagtgtccgactggtttaacg
acattatctataaatcactgtaagaatgtcctggtcaatggactgactttcatcaacagc
caattgttccacattgcgatatttgccagtgaatttgtcacaattcagaatgttaagata
tttgctccagaagacagtcccaataccgacggaatccatgttggaatgtccaacggaatc
acaattaccaacagttacatcaaaacaggcgatgactgtatctctcttggccctggaagc
acagatgtcctcatcgatcgcgtttattgtggaccaggccatggaataagcattgggagc
ttagcagaaagatcacatgagaacgcaggagtgcgcaatgtaacagtaaagagggtcgtg
atcgctggtacagacaacgggtttcggatcaaaacttttgcgcgtgacagcgaagctttt
gtggatcaagtatcatttcggcacgccgtcatgagaaatgtctcaaaccccatcatcatt
gatcagaaatattgctccagcaaagaaaattgtccccagggtgactctggggtaaagatc
actaatgtcaaattcgagaatatccgaggcacatcagcaacaccagtcgctataaaagta
gactgcagtgcaacaaacccgtgcacgggcatcaaattgaaggatgtagacctcaagtac
agggatcaaattgcaaaatcattttgtagaaatgccaaaggatcgctatctggttttgtt
tcccctcctattgattgtttctga
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