Asparagus officinalis (garden asparagus): 109838969
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Entry
109838969 CDS
T05243
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109838969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109838969
03036 Chromosome and associated proteins [BR:
aof03036
]
109838969
Spliceosome [BR:
aof03041
]
Complex B
Other components
Prp19-related factors
109838969
Complex C
109838969
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109838969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
TPR_14
TPR_19
HAT
TPR_16
TPR_2
TPR_17
RAB3GAP2_C
HAT_Syf1_M
TPR_12
TPR_EMC2
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
109838969
NCBI-ProteinID:
XP_020262992
LinkDB
All DBs
Position
1:107336472..107351389
Genome browser
AA seq
476 aa
AA seq
DB search
IKYAKFEMKMGEVAKARAVYERAVDLLSEDEEAEVLFVAFAEFEERNKETERARCIYKYA
LDHIPKGRAEDLYRKFVAFEKQFGDREGIEDAIVGKRRFQYEEEVRKNPLSYDTWFDYIR
LEESVGRKEMIREVYERAVGYVPPAEEKRYWQRYIYLWINYALYEELDAKDMERTREVYM
ACLNLIPHKKFSFAKIWLMAAQFELRQKNLKDARLVLGNAIGKAPKDKIFKKYIEIELQM
GQIDRCRTLYEKYLEWAPANCYAWSKYAELERSLNETDRARAIFELAIAQPALDMPEVLW
KAYIDFEIYESEYERTRQLYDRLLDRTKHLKVWLSYAKFEASLAMEQEDEDKEKQATSDA
EQKMECIQRCRGVFERAFDYFRTTAPELKEERAMLLEEWLNMESSFGSLGDVGIVQKKLP
RKVKRKRAIRSEDGTPAGYEEYIDYVFPDEVAMAPNLKILEAAYKWKKHKSGSDEE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
attaagtacgccaagtttgagatgaagatgggggaggttgccaaggcgagggcggtgtat
gagagagcggtggacctgttgtcggaagatgaggaggccgaggtgctctttgtggcgttt
gcggagttcgaggagaggaacaaggagacggagagggcgaggtgcatttacaagtacgcg
ctggatcatataccgaaggggagggcggaggatttgtataggaagtttgtggcttttgag
aagcagtttggggatagggaggggatagaggatgcaattgtggggaagaggaggtttcag
tacgaggaagaggtgaggaagaaccccttgagctatgatacgtggttcgattatataagg
ttggaggagagtgtggggagaaaagagatgattagggaggtttatgagagggctgtaggg
tatgtgccgccagctgaggagaagagatactggcagcggtacatttatttgtggatcaat
tatgcactttatgaggaacttgatgcgaaagatatggagcggacaagagaagtttacatg
gcatgccttaacttgattcctcacaagaaattctcttttgcaaagatatggctcatggca
gctcaattcgagttaaggcaaaaaaatctcaaggatgcacgcctagtcctgggcaatgca
attgggaaggctccaaaagataagatatttaagaagtacatagaaattgaactccagatg
ggtcaaatcgatcgttgcagaaccctatacgagaagtatctcgagtgggctcctgcaaat
tgctatgcttggagcaaatatgctgagctggagagatcattaaatgaaactgatcgggct
cgagcaatatttgagcttgctattgctcagcccgcactcgacatgccagaggtgttgtgg
aaggcatacattgattttgagatatatgagagtgagtatgagagaacaagacaactgtac
gatcggctacttgaccggacaaagcacttgaaggtgtggttaagttatgccaagtttgag
gcttctcttgcaatggaacaggaagacgaagataaagagaaacaggcaacgagtgatgct
gagcaaaaaatggagtgcatccaacggtgtcggggtgtgtttgaaagagccttcgattat
ttcagaacgacagcacctgaactaaaagaggagagagccatgctcctggaggagtggctc
aatatggaaagcagctttggaagcctcggggacgttggtattgtacaaaagaaattgcca
aggaaagtaaagaggaagagagctattcgatctgaggatggaactcctgctgggtacgag
gagtatattgactatgtattccctgatgaagtggcaatggctcccaatttgaagatatta
gaagccgcttacaaatggaagaagcataaatcaggttcagatgaggagtaa
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