Asparagus officinalis (garden asparagus): 109839149
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Entry
109839149 CDS
T05243
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109839149
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109839149
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
109839149
NCBI-ProteinID:
XP_020263169
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Position
1:complement(18444295..18446297)
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AA seq
315 aa
AA seq
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MTQNVGPGLRMYKVTDPSDDPVNPRPGTLRYGATTIAGKVWISFEGDVLIKLRRPLLVSS
YTAIDGRGANVRIENGDGFLLREVKNVIIHGLNFHHNQPTTAGPVVGPGGAVDDHGKSDG
DAISIMHSNNIWIDHNTLSQGQDGLIDVTHGSTNVTISNNWFMDHDKVMLLGHSDTFVED
SEMKVTVAFNRFGPNCNQRMPRVRRGYAHVVNNFYDGWKEYAIGGSMNPSITSQANVFVA
PESNKEVAWEEPGNAKWNFKSVGDGFVNGARFGQANESQSGPLYASQQMFTVGKQEEVRS
LTRDAGALKCHGKTC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaacgtggggccgggcttaaggatgtacaaggtcacggaccctagcgatgac
ccggtaaaccctaggccgggtacgttgcgctatggagcgacgacgattgccggaaaagtt
tggatcagttttgaaggagatgtgctcatcaagctcaggaggcctctcctcgtcagtagt
tacactgccattgatggtagaggggctaacgtgcgtattgaaaatggagatggcttcttg
cttcgcgaggtgaagaatgtgatcatccacgggctgaacttccaccacaaccaacccact
accgcaggcccagtcgtaggtccgggaggagcagttgatgatcatggcaaatctgatggc
gatgctatcagcataatgcattcgaacaacatctggatcgatcacaacaccctctctcag
ggacaagatggtctcattgacgttacacatgggtcgaccaatgtaaccatttccaacaac
tggttcatggaccacgataaggtcatgctgctcggtcacagtgataccttcgtcgaggat
agcgaaatgaaggtcacagttgcatttaataggttcggacctaactgtaaccagcgcatg
cctagggttcgaagagggtacgctcatgtggtgaataatttctatgatgggtggaaggag
tacgcaattggtggtagcatgaacccctctatcacaagccaagccaatgtgtttgttgct
cccgaatctaacaaagaggtagcatgggaagaaccagggaatgcaaagtggaatttcaag
tcggtgggcgatggtttcgtcaacggagcaagatttgggcaggcgaacgaaagtcaaagc
ggacctttgtatgcatctcagcaaatgtttacggttggaaaacaggaagaagtgaggtcg
ttgacgagagatgcaggtgcactcaaatgccatggaaagacatgttga
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