Asparagus officinalis (garden asparagus): 109841659
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Entry
109841659 CDS
T05243
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109841659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109841659
03012 Translation factors [BR:
aof03012
]
109841659
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109841659
Translation factors [BR:
aof03012
]
Eukaryotic type
Release factors
109841659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
109841659
NCBI-ProteinID:
XP_020266196
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Position
5:complement(1871004..1877185)
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AA seq
436 aa
AA seq
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MADAHETDRNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVAKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYSRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREILHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYTLKNSVSGEVIIKHLNKEQEAVQSNFRE
PATNAELEVQEKLPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDEEVYDDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctcacgaaactgataggaacattgagatatggaagataaagaagctcatc
aaagctttggaggccgccagaggcaatggcacaagcatgatttctctgattatgccacct
cgtgatcaggtatctcgagtggctaagatgctgggtgatgaatatggaactgcatcaaat
atcaagagtagggtcaaccgacaatctgtattgggagctatcacttctgctcaacagagg
ttgaagctctacagcagggtccctcccaatggactagttttgtacactggaaccattgtt
actgacgatgggaaggaaaagaaggttactatagattttgagccattcaaacccatcaat
gcatcactctacctttgtgataacaagttccatacagaggcattgaatgaacttctggaa
tctgatgacaaatttggtttcatagtgatggatggaaatggaaccctttttggcactttg
agcggtaacactcgtgagatacttcacaagttcagtgttgatctcccgaagaagcatgga
agaggagggcagtcggcacttcgatttgctcgtcttcggatggaaaaacggcacaactat
gttaggaaaaccgctgaactggcaacacaattctacattaatcctgcaacaagtcagcct
aatgtttctgggcttatcttagctggttctgctgattttaaaacagagctgagccagtct
gacatgtttgatccccggcttcaggctaagattctcaatgtcgttgatgtttcatatgga
ggggagaatggtttcaatcaggctattgagctgtcagcagaaattttatcaaatgtcaag
tttattcaggagaagaagttgatagggaaatactttgaggagattagtcaagacactgga
aaatatgtctttggtgtggatgacacactaaaagctctcgagatgggtgctgttgaaacc
ttaatcgtttgggaaaatctggatattaacagatacacactgaagaactctgttagcggg
gaggtcattataaagcatcttaacaaggaacaagaagcagttcagagcaacttcagagag
cctgcaactaacgcagagcttgaagtgcaagagaaactgccattgttggagtggtttgcc
aatgagtacaagcgttttggttgcaccctcgagtttgtcaccaacaaatctcaagaggga
tctcagttttgccgaggttttggtggcattggtggtatacttcgctaccagcttgatata
aggtcttttgacgagctctcagacgaagaagtgtatgatgactctgattag
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