Asparagus officinalis (garden asparagus): 109851260
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Entry
109851260 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein sec23-like
KO
K14006
protein transport protein SEC23
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109851260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109851260
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109851260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
109851260
NCBI-ProteinID:
XP_020276903
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Position
8:16316452..16348338
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AA seq
762 aa
AA seq
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MAEFADLESQDGVRMTWNVFPGTKQEATSCVIPTACIYTPLKPVPNVPVLPYGPLRCRIC
RSILNPFSVVDYVANIWICPFCYQRNHFPQHYSSISRATSCSELYSQYTTDRVESSPDTG
PTVPPVFLFVLDTCIIEEELGYLKSALAQAIELLPEKSLVGLITFGTYVQVHELGFGQMP
KSYVFKGSKEITKDQILEQMNFFVQKPRPPVGVIAGTRDGLSAESIARFLLPASECEFVL
ISFLEELQKDPWPVPADERASRCTSTALSIAASLLGVCVPGSGARIMAFIGGPSTEGAGS
IVSKNLSEPIRSHKDLDKGSASLYSKAVKFYEGLSKQLVHQGHVLDLFACALDQVGLSEL
KVAVERSGGIVVLAESFGHSVFKDSFRRIFQSSDYDLGLSFNGIFEVNCSKDVKVQGIIG
PCASLEKKGPLCSETVVGQGKTCAWKMCGLDKKTSLCIMFEIAKKDDPDAIGQPASNQFY
FQFLTYYQHNDGNMRIRATTLCRKWVAGPGSIQDLLDGFDQEAAAAVMARLVSFNMESEA
DFDPIRWLDRSLIRVCSKFGDYQKDNPSSFSLSPRLSIFPQFIFHLRRSQFVQVSNNSPD
ETAYYRMMLNRENVANSVVMIQPLLISYSLQSAPEPVLLDVTAIAADRILLLDSYFTVVV
FHGLTIAQWRNHGYQNEAEHQAFAQFLQAPRDDADVIIKERFPVPRLVICDQYGSQARFL
LAKLNPSVTYNSDYPPPGGDIIFTDDVSFHVFLDHLQRLAVQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgcagatcttgagtctcaagatggcgttagaatgacttggaatgtgttt
cctggcacgaaacaggaagcaacgagctgtgttatccctacagcctgcatctacacccca
ctgaagcccgtcccaaatgtccccgtccttccctatggtccgcttcgttgcagaatctgc
cgttctattctcaacccgttctccgttgtggactacgttgcaaatatttggatttgcccg
ttttgctatcaaagaaaccattttccgcagcactattcgtctatctcgagggcaacctcc
tgctctgaactatactctcagtacactaccgatagagtagagtcgtccccagacacgggc
ccaaccgtgcccccagtgttcctcttcgtgcttgacacctgtatcattgaggaggagctc
gggtacttgaagtctgcattggcccaggctatcgagttgcttcccgaaaagtcccttgtt
gggttaataaccttcggaacttatgtgcaggttcatgagttaggatttgggcaaatgcca
aaatcatatgtattcaagggttcaaaagagatcacaaaggatcaaattctggagcaaatg
aatttctttgtgcagaaaccaaggccgcctgttggagtaattgctgggactagggatggt
ctatcagcagagagtattgctaggttcctgttacctgcatctgagtgcgagtttgtccta
atttcatttctggaggaacttcaaaaagatccttggcctgtcccagcagatgagcgtgca
tcacgatgcaccagcacagcattaagcatagcagctagtttattaggagtttgtgtacct
ggttctggggcaaggattatggccttcatcggtggtccatcaacggaaggtgctggctct
attgtatccaagaatttatccgagcctattcgttctcacaaggacttagataaaggctcg
gcctctctttacagtaaagctgtcaagttctatgaggggctctcgaaacagcttgtacat
caaggacatgtgcttgatctgtttgcatgtgcgcttgaccaggttggattgtcagaacta
aaagttgcagttgaaagaagtggtggaattgttgtgcttgcggagagttttggtcattct
gttttcaaggattcatttaggcgcattttccagtctagcgattatgaccttggcttgtca
ttcaatggtatctttgaggttaattgctcaaaagatgttaaagttcaaggcattattggt
ccttgtgcttctctcgagaagaaaggccctttgtgctccgaaacagtagtaggtcagggg
aaaacatgtgcatggaagatgtgtggtcttgacaagaaaacatctctgtgtataatgttt
gagatagcaaagaaagatgatccagatgcaattggtcaacctgctagcaatcagttctat
ttccaatttttgacatattatcagcacaatgatgggaatatgaggatacgtgcaactact
ctttgtagaaaatgggtagctggacccggtagcattcaggatttgctggatggatttgat
caagaagctgctgctgcagttatggcacgcctggtttcatttaacatggaatctgaggct
gattttgacccaattagatggcttgatcggtcgttgattcgagtatgttctaaatttgga
gattatcagaaagacaacccatcttcgttcagcttatcacctcggctttcaatatttcct
caattcattttccatcttaggcgatctcagtttgtccaggtctctaataacagtccagat
gagactgcctattatagaatgatgttgaacagagagaatgtggctaactcagtcgtgatg
atccaacctttactcatatcctattccttacagtcagcgccggagccagttcttttggat
gttactgcaattgctgctgataggatactgcttttggattcttattttacggtagttgtt
tttcatggattaacaattgcacaatggagaaaccatggctaccaaaatgaagctgagcac
caggcttttgctcagtttctgcaagcccctagagatgatgctgatgtcataattaaggaa
cgatttccagttcctcgtttagtcatttgtgatcaatatggttctcaggcacgttttctt
ctggcaaaattgaacccttcagttacttacaactctgactatcctccacctggaggagac
atcattttcactgatgatgttagcttccatgtgttcctcgatcatcttcagagattggcg
gttcaataa
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