Amycolatopsis keratiniphila: AORI_0127
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Entry
AORI_0127 CDS
T02678
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aoi
Amycolatopsis keratiniphila
Pathway
aoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AORI_0127 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoi03400
]
AORI_0127 (mutM)
Enzymes [BR:
aoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AORI_0127 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AORI_0127 (mutM)
DNA repair and recombination proteins [BR:
aoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AORI_0127 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AGM02716
UniProt:
R4SR90
LinkDB
All DBs
Position
131154..132017
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AA seq
287 aa
AA seq
DB search
MPELPEVEALAHHLREHAVGKTVFRVDVSSLSVLKTATPPWTELHGREVTGAGRFGKHLD
LVAGDLHLVVHLARAGWLRWSDALSPTPLKPGKGPISLRVHLDAAAGPGFDLTEAGTKKG
LAVWIVRDPEKEVASIARLGPDALSLDRTQLEKLFTGRTERLKTALTDQSLIAGIGNAYS
DEIMHMAKLSPYATTGKLSEAALDGLSEAIREVLTSAVTRSVGQSAARLKGEKRSGLRVH
ARTGLPCPVCGDTIREISFADKSFQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacccgaggtcgaagcgctcgctcaccacctgcgtgaacacgcggtgggc
aagacggtcttccgtgtcgacgtgtcgtccctcagcgtgctgaagacggcgacaccgccg
tggaccgagctgcacggccgcgaggtcaccggggcgggccggttcggcaaacatctggat
ctcgtcgccggcgatctccatctggtcgtccacctggcgagggcgggctggctgcgctgg
tccgacgcgttgtcgccgacgccgctcaaacccggcaaggggccgatctcgctgcgcgtc
cacctcgacgcggccgccgggccgggcttcgacctcacggaggccgggacgaagaagggc
ctggcggtctggatcgtgcgcgatccggagaaggaggtcgcgagcatcgcgcggctcggg
ccggacgcgctttcgctcgaccgcacgcagctcgagaagttgttcaccgggcgcaccgaa
cggttgaagacggcgctgaccgatcagtcgctgatcgccgggatcggcaacgcctactcc
gacgagatcatgcacatggcgaagctttccccttacgccacaaccggaaagctgtccgag
gcggcgctcgacgggctttcggaggcgatccgcgaggtgctgaccagcgccgtgacgcgt
tcggtcggccagtccgcggcccggctcaagggcgagaagcggtccgggctgcgggtgcac
gcgcgcacggggctgccgtgtccggtctgcggcgacacgatccgcgagatctcgttcgcg
gacaagtcgttccagtactgcccgacctgccagaccggcgggaaacccctcgcggaccgg
cggatgtcgcgcctgctgaagtga
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