Anastrepha obliqua (West Indian fruit fly): 129238986
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Entry
129238986 CDS
T09777
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoq03037
]
129238986
Cilium and associated proteins [BR:
aoq03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
129238986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
TPR_7
WD40_CDC20-Fz
Beta-prop_EML
TPR_COPA_B
TPR_12
TPR_1
Clathrin
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40
TPR_8
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
TPR_GEMI5
TPR_IFT80_172
DUF244
Motif
Other DBs
NCBI-GeneID:
129238986
NCBI-ProteinID:
XP_054730217
LinkDB
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Position
2:complement(84039491..84047938)
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AA seq
1489 aa
AA seq
DB search
MTLYFDTKVEFLDSDAVSTIGNWHISEPLFAVASYSQERGGSITIFTDSGEPQRDVTYPV
HPTSQVTALAWHPEKVLLATGWENGDIHVWFAGHREFASVHGPHKAPILLLDFSEQGGRM
VTADAKGLLTGWRCDGQYQFLTMFSHDLRDVLLHITFRRTIESEVREEMANLAKAAVAGD
DAALDTLTNWRPRTAARSMTHAGVKDNHCFYVGTQNGVMYYINQGGTCTEVLKNNTVPIM
QMLWHPKKDAVICLMKDMTIALYLVESTGILTELDRVKLSGNLSGKEGAISWAGNSLAII
TGDLSVRIWDIEKSDNYLLKMDLPSTAVSVLASSSSLEINSSSTSFYNNDSSDKSSTLNS
RKLQKLMQPTNEFFTCLAYSTGNQTLCAGTNQGNLYTWKRRAGQHDMPEDSWQLTNISTV
RGAVKQCIWGFNELAKPCILINCISNVYVLREQPLLSFHTRDLWAAQRNAKSIYLEHIIG
KHALIQAEFAIIALALNQLNLIISNGRVISAYSIEKVQRVDDYRMEAYTDDSATGDSNDK
DPNLNVKLIQTFNAECLSLNIQNQNIFCLTSNEVMIYSIGGVVLNKILANDNEGKIIGMD
LTGAYLSVFTMNGFIKAYDVSRHDPKLIFPGKSGYDLFDDFGEVILVKCNTAGTHLAAVI
ANRSFVPKPILYCWNFERNHLMEHSLVNNANENNNTPCMPVNVYWDTDESRLLAIEVKSM
QQPHELRQTSKSGGNHTGTNSIESEVLVLFFSDKCKLNVLEKRSLGLGEQLINLCVPNVI
TLDTNIVKERSLQDFVDLNKCDENVRKMVLNFSLHIAEGNMDLAYRCIRSIQSPTIWTNL
AKMCVKTNRLDVAKVCMGHLEKARSVRALRQAMEDDDLEEEAKLAVLAIELGMHDKAIEL
YKKCGRYDLLNKLLQARGKIDEAIQIAETEDRVHLKNTYFYKALQLKESGDIKGALEYFE
KSQNPVQNITQMLLDNPLAMKRYMQNSTDPKMLKWWGQYIESSGDMDAALAVYQKAEDWF
SQVKILCYLGKISKADAIARQSGDRAACYHLARHYENVGKFQEAIMFYTRAQTFSNAIRI
CKENDFQDELWTVASSSRSRDKAIAAAYFEECGSFKRAVELYHRAGMLHKALEMAFESEQ
PEVLEIIASELTVDSDSELVNRCADFFTSIEQHQKAVYLLAKTKYLKRSLQICMEKGIPI
TEELAQMLTPNKNELDEQTRIEILTQLGDLLQQQGDYHTATKKFTQAGDKVRAMKSLLKS
GSTEKIIFFANMSRQREVYIMAANYLQALNWQEDQLIHKHIVTFYSKGQAYDSLANFYAI
CAQIEIEEYHDYEKALKAMHEAANCLRKLGHSQHALNNLEKTIADVKKILDIQNALKNGD
HPAVISGCRNMLIKPETPPIRQADILAMLVRALAYSKQWTEAGRALKELAVKDNAWSTIG
LVDKALVQKIAKECNLDFDIIWNSGRKRVNVKDDETDPGREEEIEEELR
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgacgctatacttcgacacaaaagttgaattccttgattccgatgcagttagcaccatt
ggaaattggcacatcagcgaaccattattcgctgttgcttcctacagtcaggaacgcggt
gggtcaataacaattttcacagattcgggtgagccacaacgggatgttacctatccagtg
catcctacttcacaggtcactgcgcttgcttggcatccggaaaaggtcttattagcgaca
ggttgggagaatggcgatatacatgtttggtttgccggtcatcgggaattcgctagcgtt
cacggtccacataaggcaccgattcttttgctggactttagcgaacagggtggtcgcatg
gtaaccgccgatgcaaagggtctccttactggttggcgttgcgatggccagtatcagttt
ttaactatgttttcgcatgatctacgtgatgtgttgctgcatataacatttcgacgcacc
atcgagagtgaggtgcgtgaggaaatggcaaatttggcaaaggcggctgtggcaggcgat
gacgcggcactggatacgctcaccaattggcggccacgaacagcggcaagaagtatgaca
catgcgggtgtgaaagataatcactgcttttatgtgggcacacaaaatggtgtaatgtac
tatatcaatcagggtggcacctgcacggaggtgctaaagaataatactgtgcccatcatg
caaatgctgtggcatccaaagaaagatgcggttatttgcttaatgaaggatatgactatc
gctttgtatttggtggaatcgactggtatactcaccgaattggatcgggttaagttaagt
ggtaatttatctggcaaggaaggagctatttcgtgggctggcaatagtttggcgattata
acaggggacctgagcgttagaatttgggatattgaaaaaagtgataactatctcttaaaa
atggacttgcctagtactgcagtttctgtactggcttcttcgagcagtctcgaaattaac
tcatcaagcacaagtttttacaataacgacagcagtgataagtcctcgacactgaacagc
cgtaaattgcagaaattaatgcagccaacaaacgaattcttcacttgcctcgcctacagt
acgggcaaccagacactttgcgccggcaccaatcaaggtaacctttacacttggaagcgt
cgtgcaggccaacacgatatgcccgaagattcgtggcaattgacgaatatttcgaccgta
cgtggcgccgttaagcaatgcatttggggtttcaatgaattggcgaagccttgtatactg
atcaattgcatctcgaatgtttatgtgctaagagagcaaccactcttatcttttcacaca
cgcgacttatgggcagcccaacgcaatgcaaagtcaatttacctggaacatatcatcggc
aagcatgcgcttatacaagcagaattcgcgatcattgccttagcgctgaatcagctaaat
ttgataattagtaatggccgtgttatatccgcatatagcatagagaaagtgcaaagggta
gatgattacagaatggaggcatatacagatgacagcgcaactggcgacagcaatgataaa
gatccaaatcttaacgtgaagctaatacaaaccttcaatgccgaatgtttgagcctaaac
atacaaaatcagaatatattttgtttaacatctaatgaggtgatgatatactcaattggt
ggagtggtgctcaataaaattttggcgaacgacaacgaaggaaaaatcattggcatggac
ctcactggtgcctatttgagtgttttcactatgaatggcttcattaaagcctatgatgtt
tctcggcatgaccctaagctaattttccctggcaaatccggttacgatttatttgatgat
tttggggaagtaattttagtgaaatgtaacactgcgggaactcatttagctgcagtgatc
gcgaatcgcagttttgtaccaaaaccgatcttatattgttggaacttcgaacgtaatcat
ttgatggaacacagcctcgtaaataatgcgaatgagaacaacaatacgccatgcatgccc
gtgaatgtgtattgggatacagacgaatcacgcctgctagctattgaagtcaagtcaatg
caacaaccacatgagttaaggcagacatcaaagtctgggggaaatcataccggtactaat
agcatcgaatctgaagttttggtcttgtttttctcagataaatgtaagttgaatgttttg
gaaaaacgctcattgggcttaggggagcaattgatcaatctttgtgtgccgaatgtgata
actttggatacaaatatcgttaaagaacggtctctacaagatttcgtcgatctcaataaa
tgtgatgaaaacgtacgaaagatggttttaaattttagccttcacattgcagagggtaac
atggatttggcctatcgttgcatacgttccatacaatctccaacaatatggacaaatttg
gcaaaaatgtgtgttaaaactaatcgcctagatgtggctaaggtgtgcatgggtcattta
gaaaaggcacgatcagtacgtgcgctccgtcaagctatggaggacgatgaccttgaagaa
gaggcgaagcttgccgtgctcgctatagagctgggcatgcatgacaaagcaattgaactg
tacaaaaaatgtggcagatatgatttattgaataaattgctacaggcacgtggaaaaatt
gacgaggcaatacaaatcgcagaaacggaagatcgtgttcatttaaagaacacatatttc
tacaaagctctgcagcttaaagaaagtggggatattaagggagctttggagtattttgaa
aagtctcaaaacccagtgcagaatataacacaaatgcttctggataatccactggcaatg
aagcgttacatgcaaaattctaccgatccaaaaatgcttaaatggtggggacaatatatt
gaaagttctggtgacatggatgccgcgctggcagtatatcagaaagccgaagattggttt
tcacaagtgaaaatactttgttatttagggaaaatatctaaagcggatgctatagcacga
caatcaggcgatcgggctgcctgctatcacttagcccgtcattatgagaatgttggaaaa
tttcaagaagccatcatgttttacacacgtgctcaaacatttagcaacgctattcgtata
tgcaaggaaaacgacttccaagacgagctttggactgttgctagttcctcacgtagtcgc
gataaggctattgctgcggcttacttcgaggaatgtggatctttcaagcgtgcagtagag
ttatatcatcgtgctggcatgctccataaggcactagaaatggcatttgaatcagaacag
ccggaggtgctagaaataatcgcttcagagttaactgttgactcagattccgagttggta
aaccgttgtgcagacttttttacgagcatcgaacaacatcaaaaagctgtatatctgttg
gcaaagacgaaatatctgaaacgatcgttacaaatctgcatggagaaaggcattccgata
accgaagaacttgcgcaaatgctcacgccaaataaaaatgagctagatgagcaaacgcga
attgaaattctgacacagctgggagatttacttcaacaacaaggcgactatcacacggca
accaagaaatttacacaggctggcgataaagtgcgcgcaatgaaaagtttacttaagtcg
ggcagcaccgaaaagataatattttttgcgaatatgtcccgacagcgtgaggtatatata
atggcagctaactacttgcaggcgttaaattggcaagaggatcagcttatacataagcat
attgtaacattctactcgaagggtcaggcatatgattctttagcaaacttttatgcaatt
tgcgcacagattgaaattgaagaatatcacgactatgagaaggctttaaaagcaatgcat
gaggcggccaattgcttacgaaaacttggccattcccaacatgctctgaataatttggaa
aagaccatagcggacgtaaaaaagatcttagatatacaaaatgcattgaaaaatggcgat
catccagccgttatctcaggctgtagaaatatgttaatcaaaccggaaacaccgccaata
cgtcaagcggacattctcgctatgctggttcgtgccttggcttattctaaacagtggacc
gaagctgggcgcgctttgaaagaattggcagtaaaagataatgcctggagtacaattggc
ttggttgacaaagctttggtgcaaaagatagcaaaagaatgtaatttggattttgatatt
atttggaattcgggacgaaagcgtgtaaacgttaaagatgatgaaaccgatccgggcaga
gaagaagagatagaagaagaattacgctga
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integrated database retrieval system
