Anastrepha obliqua (West Indian fruit fly): 129244807
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Entry
129244807 CDS
T09777
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129244807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoq03019
]
129244807
Messenger RNA biogenesis [BR:
aoq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
129244807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_14
TPR_1
TPR_8
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_6
TPR_7
TPR_17
TPR_9
TPR_11
ARM_TT21_C
ANAPC3
DUF7017
TPR_20
UTP6_C
TPR_Slam
DUF4919
Motif
Other DBs
NCBI-GeneID:
129244807
NCBI-ProteinID:
XP_054738635
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Position
4:complement(69158846..69166031)
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AA seq
1236 aa
AA seq
DB search
MSSKETKAILKEVREAIKTENFNDAIEKCEALLQDEPNNYMAYLLLGAAYQNSNKDQAAK
YLRKAVEFSPAAPTVALQGLANCAPLNELPKIYEQLLDLVPEKCSYYFERLYVAGLNNRC
VGEECFNILKSELKRNDQDVERRKYVLKYLAQLWVHFEFDVVEEDETTYKYALEELIADP
DAEQYLNAYKRYLKLLYKKGDYTNCIKHACAVTEKYPHDIYAYEWVCKIYCESREVATEC
LNNQNQNIEQYVAALLQLNKNASLGLLIKAIEFYEQRQFVAARDLLYRVRELQPTYTIAL
ELLARVEMVIGVWSTALSIWCKIGKKNSVEHALCLSHVSNEKAQLRETTEMLQKFDQNED
VMAVLARCYFKLGYIDQLKTLQLSILQQAEFLETPEAAIDLLQSCADTESFETLFLLSKL
HLQLSHYATALNCMLKATRLQPYCAECFHYLGKIYYVTKDIVRARKCFEKCVSLNPLCED
AVNNLSAIYQQLGEEDLNVALLLNTLQHMEFNDSKRIHYKLGLHFFNVNKWDDAIQSFRT
AIKLDVSCMHYWESLGDAYAERGSYNSAIRVFQKILEMNPHNIYAKLQIALIKSTVRMYP
EAIAEFVELLRTHPDYLPGLKGAAEAHIGLANNLKLEHLYGRCKYHLQMAVNHLQRAFQS
LNDNNMFWLWRLTANVFVQTARMPSSLAYLEVSGKLAKLEDETAILSRKDLFILAARFYT
CAIKLKSNTFIWYEFALCCYYCAVYVPDVAVTQLELATKACKMAIHEQSDRWQNWNLLGV
INLHNVINNLALAQHCFIQALTLERKSYMSWTNLGALYLKLGEIKLANQAFQRAQQSSPI
YGNAWIGQAMIAEAIGEEEEALDLFRHCQQFEYHPESALGYAHWVCTVLADPQKCEITHY
RHAINSMYADVVALDAINWYLVNEEKDATLAALSFQGFLNLQQKHYRPAERAYLQAVEST
VATTNEQRDKLLTNLGYLYLKMNRPNDAINVFNRVTHASLKAIIGLALAFVRAGQHQEAY
SLYNSVLKSLVADNEDKAGMILVAMAAMVYASQGEADTKTILYQCILLKNSPIQALYSAC
ALGILHDDNQLTMTILTELKKYENSGAHSGHIAYLTAQHYVATKKTRKGLTYLLSRVHVF
PHCAELRKVLADFLLNNFSHASQYHVATSQIALSSISLSHRNKAQKSDCIEDSKSLLIAS
RALKPVDKLRSLKLIQHAIRLHPQNQNAWLALQEVY
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaggagaccaaagcaatacttaaggaagttcgagaagctattaaaactgaa
aatttcaacgatgcaatagagaaatgtgaagccctgctgcaagatgaacccaataattat
atggcttatttactattaggagcggcctatcaaaatagcaataaagaccaggcggcaaag
tatttacgtaaagcggttgagttttcaccagctgcaccaactgttgcgctacagggttta
gctaactgcgctccactgaatgaattgcccaaaatttatgagcaattgttagatttagta
cctgaaaagtgtagttattattttgagagactttacgtcgcaggactcaacaacaggtgt
gtaggcgaagaatgttttaacattttgaagagtgaattaaagcgaaatgatcaagatgta
gaacgtaggaaatatgtattgaaatatttagcgcagctttgggtgcattttgaatttgat
gtggtcgaagaggatgaaactacttataaatatgctttggaggagctgatagcggatcct
gatgctgagcagtatttaaatgcatacaaacgttatcttaaacttctatataaaaagggt
gattacacaaactgcattaaacatgcttgtgcagttaccgaaaaatacccccacgatatt
tacgcttatgagtgggtgtgcaaaatttactgtgaatcccgtgaagtggctacggaatgc
ctaaataatcaaaatcaaaatattgaacagtatgtagcggcattgttacagctgaataaa
aatgctagtttagggctacttatcaaagcaatcgaattttatgagcagcgacaatttgta
gcagcgcgagatttgctatatcgggttcgtgagttgcaaccgacatacactattgcgttg
gagttgttggcgcgcgtagaaatggtgattggtgtttggagcacggctttgtcaatatgg
tgtaaaattggaaaaaagaattctgttgaacatgccctgtgtttgtcccatgttagcaac
gaaaaggcacaattacgagaaactaccgaaatgttacaaaaatttgaccaaaatgaagat
gtaatggcagttttagctaggtgttattttaagcttggttatatagaccaattaaagaca
ttgcagttaagcatactgcagcaagcagagtttctggagacgcctgaagctgctattgac
ttattgcaaagctgcgcggatacagagtcattcgaaacactttttttactatccaaattg
cacttgcaattgtctcattatgccaccgctttgaattgtatgctcaaagcgacacgcttg
caaccatattgcgctgaatgcttccactatctcgggaaaatctactatgttacgaaggat
attgtgcgtgcgcgcaaatgtttcgaaaaatgtgttagtttaaatcctttgtgcgaggat
gcggtgaataatctaagcgctatttatcagcaattgggtgaagaggatttgaacgtggca
ttgttgcttaacactcttcaacatatggaatttaatgattctaagcgtatacattacaaa
ttaggcctgcatttttttaatgttaacaaatgggatgatgctatccaatcatttcgcact
gctataaagctcgatgtcagttgcatgcattattgggaatctctgggtgatgcgtatgca
gagcgcggttcctataattctgccatacgcgtttttcaaaaaatactagaaatgaatcca
cacaatatttacgcaaaattacaaattgcattgatcaaatcgactgtacgcatgtatccc
gaagctatagccgaattcgtcgaattgctacgaactcatcccgattatttgcctggttta
aagggggctgctgaagcacacattggtttggcgaacaatctaaagctggaacatctatac
ggacgttgtaaatatcatttacagatggctgttaatcatttacaacgtgcttttcaatcg
ctaaacgataacaacatgttttggctatggcgtcttaccgctaatgtatttgtacaaacg
gcgcgcatgcccagctcattggcttacttggaggtgtcgggcaaactggcgaaattagag
gacgaaacagcgattttgtcaagaaaagacctgttcatattagcggcgagattttacact
tgtgccattaaattgaaatcaaacacatttatttggtatgaatttgccctatgttgttat
tattgcgctgtttacgtgcctgatgtagcagtcactcaattggaattggcaaccaaagct
tgtaaaatggctatacatgaacaaagtgaccgttggcaaaattggaatttgctgggagta
ataaatttgcataatgtaataaataacttggctttggcgcagcattgtttcatacaggca
ctaacactagaacgtaaatcgtatatgtcatggacaaatctgggcgcactttatttaaag
cttggcgaaataaaacttgcaaatcaggcttttcagagagcacagcagtccagtcctata
tatggaaatgcttggattgggcaggctatgatagctgaagcaatcggtgaagaagaggaa
gcattagatctcttcagacattgtcagcagtttgaatatcaccctgagtccgcactcggt
tacgcccactgggtgtgtacggtgttggctgatccacaaaagtgtgaaattacacattac
cgacatgccataaacagcatgtatgcggacgtggtcgcattggacgcaattaattggtac
cttgtgaatgaggaaaaggatgcaacacttgccgcactttcgttccagggctttttaaat
ttacaacaaaaacattatcgtccagcagagcgggcatatcttcaggctgttgaatcgaca
gtagcaacaactaatgaacagcgtgataaattactaacaaatttgggttatctttattta
aaaatgaatcggccgaatgatgcaataaatgttttcaatcgagtgacacacgcgtcgtta
aaggccataattgggttggctctggcttttgttcgagctggtcagcaccaggaagcatat
tccttgtataactctgtattgaagagcttggtggctgataatgaggacaaagcgggaatg
atattagtagcaatggcggcaatggtttacgcctcgcaaggagaagcggatactaaaacg
attctatatcaatgcattctgctcaagaactctcctatccaggctctatattcagcgtgt
gctttgggtattctacacgacgataatcaactaacaatgactatactaacagagctaaag
aagtacgaaaatagtggagctcactctgggcatattgcatatttgacggcacaacactat
gtagctactaaaaaaacacgcaaaggtctaacatatctactatcacgtgtgcacgtattc
ccacattgtgccgagctgcgaaaagttttggccgattttctgctgaacaattttagtcat
gcctcgcaatatcatgtagctaccagtcaaattgccttgagttcaattagtttgtcgcat
cgtaataaggcgcaaaaaagcgactgtatagaggactctaaatcgttattgatagccagt
cgcgcattaaaacctgtagacaaattgcgctcgttaaagctgatacaacatgccatacgc
ctacatccgcaaaatcagaacgcttggctggcgctacaggaagtttattaa
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