Aspergillus oryzae: AO090026000670
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Entry
AO090026000670 CDS
T01018
Name
(RefSeq) unnamed protein product; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
aor
Aspergillus oryzae
Pathway
aor03022
Basal transcription factors
aor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AO090026000670
09124 Replication and repair
03420 Nucleotide excision repair
AO090026000670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090026000670
03400 DNA repair and recombination proteins [BR:
aor03400
]
AO090026000670
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AO090026000670
DNA repair and recombination proteins [BR:
aor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AO090026000670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
5994116
NCBI-ProteinID:
XP_001822088
UniProt:
Q2UEC9
LinkDB
All DBs
Position
3:complement(3268103..3269310)
Genome browser
AA seq
376 aa
AA seq
DB search
MNAVDATEHYETSARDPAPALLTVVLDTNPHAWALLEDSLPLSKAIANILVFLNAHLACN
YANEVAVVASHSQKAAWLYPHENPATKISHDADGDVSMNGSSTNNNTTEGPGQVNKYRPF
RIVEEQVTHNLRELMASTSGPDVKANNSTMMAGALTLALSHINRRSIAWAEAHGADTAAE
TSGGGPPSGGHASGTDTTEGLQSRILIVSVSGASDSAHQYIPIMNSIFACQRLHIPIDVC
KLSGDAVFLQQASDATKGIYMSLTEPRGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAA
CFCHRRVVDIGFVCSICLSIFCEPLDNGTCLTCGTNLEIGDYGAKPAVVARKRKKKKRVN
GPSGTATPTPTPTPGP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtggatgcgacagagcactatgagacgagtgcacgcgatcctgcgcccgcc
ctcttaaccgtcgtcctcgacacaaacccccacgcatgggccctccttgaagattccctc
ccgctctccaaagcgatcgcaaacatcctagttttcctcaatgctcacctagcctgtaac
tatgcaaacgaggtggccgtggtagcttcccacagccaaaaggcggcgtggctgtatccc
cacgagaacccagccacgaagatatctcacgatgccgatggcgatgtctcgatgaacggg
tcgtcgaccaataataataccacggaaggaccaggacaggtgaacaagtaccgaccgttc
cggatcgtggaggagcaagttacgcataatcttcgtgaactgatggcgtcaactagcggg
ccggacgtgaaagctaacaactcgacgatgatggcaggggcgcttacgctggctcttagc
catatcaaccggcggagtattgcgtgggctgaggcccatggggctgatacggctgctgag
acgtcgggtggtggtccacctagtggtggacatgcttctgggacggacactacagagggg
ttgcaatcgcggatcttgatcgtatccgtcagcggcgccagtgattctgcgcatcagtat
ataccgattatgaatagtatttttgcctgtcagcggcttcatattccgattgatgtgtgc
aaactgagtggtgatgcggtgtttctacaacaggcttcggatgctactaagggtatttat
atgtcgttgactgagcctcgagggctattgcagtatcttatgatggcttttctgccagac
cagcgatcgaggagacatctggttcttccaacgcgggtcgatgttgacttccgtgcggct
tgcttctgtcaccgacgggttgttgatatcggttttgtctgttctatctgcctgagcatc
ttctgcgagcctctggataacggcacctgcctgacctgtggcacaaatcttgaaataggt
gattacggcgctaagccagccgtggtcgcccgaaagaggaagaaaaagaagcgcgtcaac
ggcccgtcgggtaccgctacacctacgcctacgcctacaccggggccctga
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