Isoalcanivorax pacificus: S7S_18555
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Entry
S7S_18555 CDS
T03580
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
apac
Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:
apac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apac03016
]
S7S_18555
Transfer RNA biogenesis [BR:
apac03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
S7S_18555
Prokaryotic type
Methyltransferases
S7S_18555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Arf
ABC_tran
GTP_EFTU
Ras
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AJD50123
UniProt:
A0A0B4XUF8
LinkDB
All DBs
Position
complement(4164179..4165561)
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AA seq
460 aa
AA seq
DB search
MTQPDTDTIVAIATAPGRGGVGIVRLSGPRALAVASALMPASRTLAPRHAHFSSFRDAEG
QLIDEGLVLYFPGPKSFTGEDVVELQGHGGPVLLDQLVQACIRQGARQARPGEFSMRAFL
NDRMDLTQAEGIADLIDAGTVAAARAAVGSLRGAFSDAVNNLVEQLIQLRIYVEAAIDFP
EEEIDFLSDGKVAGDLNDLIHATAEVLATARRGSLLREGMTLVIAGRPNAGKSSLLNALA
GNDVAIVTDIAGTTRDVLRETIQLDGMPLNLIDTAGLRESPDVVEQEGIRRAWQAIEQAD
RILLVVDSTTVTPAQLDQPDQLLPEGQRTLSSLGIPLTLVLNKADLSGLPPGIQTNHPDT
LAISAAHGNGLDALREYLKQSVGFHSGESSPFSARRRHLSALELALTSLQHGARQLGDHA
AGELLAEDLRGAQRALEEITGVFSADDLLGRIFSSFCIGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacctgataccgacaccatcgttgccatcgccaccgcgcccggtcgtgggggc
gtgggaatcgtgcgcctgtccgggccgcgcgcgctggctgtcgccagcgcgttaatgccg
gccagccgcacccttgcaccccgccatgcccatttcagcagcttccgcgatgccgaaggc
caactgatcgacgaagggctggtgctttattttccgggcccgaaatcgttcaccggcgaa
gacgtggtggaattgcagggccacggcgggccggtattgctggatcaactggtgcaggcc
tgcatccgccagggtgcccgccaggccaggcccggtgaattctccatgcgcgccttcctg
aacgaccgcatggacctgacccaggcggaaggtatcgccgatcttatcgatgccggcacc
gtcgctgccgcccgcgcggcggtgggctcactgcgcggcgcgttttccgacgctgtgaac
aacctggtcgaacaactgattcagttgcgcatctacgtcgaggccgccatcgatttcccg
gaagaggaaatcgatttcctgtccgacggcaaagtcgccggcgacctgaacgacctgatc
catgccaccgccgaggtgctcgccacggcccgtcgcggcagcctgctgcgcgaaggcatg
accctggtgatcgccggccggcccaacgccggcaagtcctccctgctcaatgccctggcc
ggcaacgacgtggccatcgtcaccgatatcgccggcaccacccgcgacgtgctgcgcgaa
accatccagctcgacggcatgcccctgaacttgatcgatactgccggcctgcgtgaatca
ccggacgtggtggaacaggaaggcattcgccgtgcctggcaggccatcgagcaggccgac
cggattttgctggtggtggattcaaccaccgtcaccccggcgcagctcgaccagccggac
caactgctgccggaagggcagcgcacactgtcgtcactgggtattccgctgaccctggtc
ctcaacaaggccgacctgtccggcttaccccccggtattcaaaccaaccacccggatacc
ctggcgatttccgccgcacacggaaatgggctggacgcattgcgcgaatacctgaaacag
agcgtcggttttcacagcggcgagtccagccccttttctgcccgtcgccggcacctgagt
gcgctggagttggcgctgacttcgctgcagcacggggcgcgtcagttgggggaccatgcg
gcgggtgagttgttggcggaggatctacgtggtgcgcagcgtgctttggaagaaattacg
ggggtgttttcggcggatgatttgctggggcggattttttccagtttctgcatcgggaag
tga
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