Andrographis paniculata: 127257902
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Entry
127257902 CDS
T08689
Name
(RefSeq) tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127257902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127257902
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
127257902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_19
TPR_20
TPR_7
TPR_9
TPR_15
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
127257902
NCBI-ProteinID:
XP_051140393
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MATEDHVSVAIDELRESLKSNPNDPAVQFNLGELLWIRGDKKNAVEHLMLAAKLNPLNAA
AFRYLGDYYAHISPEPQRSLKCYQRAVTLNPDDLEAGEAICNLLDEAGKESLELAICHEA
SEKSPRAFWAFRRMGYLQAHQRKWSEAIQSIQHAIRGFASCADLWETLGLAYQRMGMFSA
ALKSYARTLELDSLRIFALVESGNISLMLGSFRKGIEQFQQALNISPSNVSAHYGLASAL
LGFAKECANSGALKWGASLLEEASDVALRGTSLASNFSCMWKLHGDIQLMYARCFPWMEE
AWLNHADDIAFKSSISSWKETCFSAARNACHSYQHALRMTPWLASTYTDVAIASFLSSSF
KESPKQELNVWSVAEKMSLGALLLEGHNQEFWVALGCLSDLIALRQHAFIRALQLDVSLA
VAWAFLGKLYRCEGEKQLAMQAFDRARSIDPSLPLPWAGMSADAGFRKLDPNEAYECCLR
AVQIFPLAEFQVGLAKLALSSTYLSSSEVFGAIQQALQRVPQYPESHNLAGLVCESRSDY
ESAITSYRLARCALVSFADESSESHLLDISINLARSLCMAGKVSDAVEECEYLRQKGQLD
SEGLQIYALCLWRLGQNDMALSMTRSLASGILSMEENLAATTISLVCRLLYYISGQESAI
TSILKMPKELFHSSKLSFVVSAIHVLDANNRLQPIVSMSRLYIKDNEDIITMHTLITLGK
LLKNGNQESLGMQKGVDHLRKALHMFPNNTSLRNLMSYLLLLSKERRDLYLTTRCSPMHF
SDHQKDDILKHACEIFGAANVACYVVGSCKMKYPFAICRHQGSSGSGVVQVMQKYLHQEP
WNFSARYLLTLNFFQKAREEGFPHHICRVLERLTTVALSNDFCSSKDESSQYRKFQLLLC
AAETNLQQGYHSECLRIASSTLGSSVKKEYIFFAHLLLCRGHAAENDIISMSKEYNRCLE
LKTDLHIGWICLKLIESRYGLQDNTNMLASSYENCSKDTSLSWNIWMALFNMVHGLIAIG
ASDFVAAEEFLMQACSIADSESHLFLCHGAISMELAKQKCESQYISRAIRSLKKAKDASA
NNLPIISFLLAQAEASLGSKAKWEMNLRNEWTSWPPEMKPAELLFQMHLLSRNSKDGFAP
YSSSYSESSHRWILKAIHTDPSCFRYWKFLLKELM
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaagaccatgtttctgttgctatagacgagttgcgggaatcactcaagtcc
aatcctaacgaccccgccgtccaatttaatctgggtgagttgctatggatacgaggggat
aagaagaacgcggtggaacacttgatgcttgcagcaaagctcaatcctctaaatgctgct
gcattcagatatctgggcgattattatgcgcatatatcacctgagcctcagcgatctctc
aagtgttatcagagagctgtgactctgaatccggatgatttggaggctggggaagcaatc
tgcaatttgttggatgaggctgggaaagagagtttggagcttgccatctgccatgaagct
tctgagaagtctccccgagcattttgggcttttcgtcgaatgggataccttcaggctcat
caaaggaaatggtctgaagccatccagagcatccagcatgcaattcgtggatttgcttcg
tgtgccgacttgtgggagaccttaggtttggcctaccaacgaatgggcatgttctctgct
gcacttaagtcttatgcgagaacacttgagttggacagtttaaggatttttgcgctggtt
gagagtggaaatatttcgctgatgcttggttcatttagaaagggaattgagcaatttcag
caagctttgaatatttcaccttccaatgtttctgcacattatggacttgcttctgcactt
cttggttttgcaaaggagtgtgccaattcaggtgccttaaaatggggagcttcactctta
gaggaagcttctgatgtggctttgcgtggtacatctttagctagtaacttttcttgtatg
tggaagctacatggagatatacagcttatgtatgccagatgtttcccatggatggaggaa
gcttggctcaatcatgctgatgacatagctttcaaatcttctatcagttcatggaaggaa
acctgcttctctgctgctagaaatgcttgccactcctaccagcatgctttgcgcatgacc
ccttggctagctagtacatatactgatgtcgctattgcatcatttctctcttcatctttt
aaggaatctcctaaacaggagctgaatgtttggtcagtggcagaaaagatgagcttgggt
gctttactgctggagggacacaatcaagaattttgggtggcattggggtgcttatcagac
cttattgcattaaggcagcatgcttttatacgtgcattgcaattggatgtatctttagca
gttgcatgggcattccttggaaagctttatcggtgtgagggtgaaaagcaattagcaatg
caagcctttgatcgtgctagaagtatcgatccttcactcccattgccatgggctggcatg
tcagctgatgcaggctttagaaagcttgatccaaatgaagcatatgagtgctgtttacgg
gctgtccagatatttcctcttgcagaatttcaagttggtcttgcaaagcttgcattgagc
tctacttacttgtcatcttcagaggtgtttggagccattcaacaagcattgcaacgtgtt
ccacaatatcctgaatctcacaacttggctgggctagtatgtgaatcacgatctgactat
gaaagtgctattacatcatacaggctggcacgatgtgctctggtatcttttgcagacgaa
tcttcagaatcccatttactagatatatctatcaatttggccagatcactttgcatggca
gggaaggtgagtgatgctgttgaagagtgtgaatatctaagacaaaaaggacagcttgat
tccgagggtctacaaatatatgctctttgtttgtggcgacttggccagaatgatatggct
ttgtccatgacaagatctcttgcttctgggattttatctatggaagaaaatcttgctgca
actaccatcagtctcgtctgtagattattgtactacatatctgggcaagaatcagcaatt
acaagtatcttgaagatgccaaaggaactgtttcatagttcaaagcttagttttgttgtt
tcggctattcatgttcttgatgcgaataatcgacttcagcctattgtttctatgagtcga
ttatatattaaggataatgaagatatcatcacaatgcatactttaatcacccttggtaaa
cttctcaaaaatggaaatcaagaatctcttggaatgcagaagggggtagatcacctgagg
aaagcacttcatatgttccccaacaacacttcattgagaaatcttatgagttatctattg
ctattaagcaaagagaggagggatctctatctcactacaagatgctctccgatgcatttt
agtgaccatcaaaaggatgatatcctcaaacatgcatgtgagatctttggtgctgcaaat
gttgcttgctatgtggtaggaagctgtaaaatgaaataccccttcgctatctgtagacat
caagggtcttctggatctggagttgtccaagtgatgcaaaagtatttgcatcaagaacca
tggaactttagtgcaaggtatttgcttacattaaatttttttcagaaggcacgggaagaa
ggattccctcatcatatttgtcgtgtactagaacggcttacaactgtggctctgtctaat
gatttttgctcaagcaaagatgaatctagccagtatagaaagttccagcttctactctgt
gcagcagagactaatcttcagcaagggtatcatagtgaatgcttgagaattgctagtagt
actttaggttcttctgttaaaaaagagtatatattttttgcacatttactgttatgccgt
ggacatgcagccgaaaatgatatcattagcatgagcaaagaatacaatagatgtttggaa
ctcaagactgaccttcatataggctggatttgtctgaaacttattgaatctagatatggt
ctgcaagataatacaaatatgctagcctcaagctatgaaaattgctctaaagatacgagt
ctttcatggaatatatggatggctctctttaatatggtacacgggttgattgctattggg
gctagtgattttgtggctgcagaagagttccttatgcaagcatgctctatagctgacagt
gagagccacctgtttctttgtcatggtgctatatccatggagctcgcgaaacaaaagtgt
gaatcacaatatatatcacgagctataaggagtctcaagaaagccaaagatgcttccgct
aataacttgcccatcatctctttcttgcttgcccaagcagaagcaagccttggttccaag
gcaaagtgggagatgaaccttcgcaatgaatggacctcttggcctccagagatgaaacct
gccgagctcctatttcaaatgcatctactttctagaaattcaaaagatggctttgcaccg
tattcctccagctacagtgaaagttcccacagatggatactaaaggccattcatactgat
ccttcatgttttagatattggaagtttttgctgaaggaattgatgtga
DBGET
integrated database retrieval system
