Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1629
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Entry
APJL_1629 CDS
T00644
Symbol
dacA
Name
(GenBank) penicillin-binding protein 5
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj00550
Peptidoglycan biosynthesis
apj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APJL_1629 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
apj01002
]
APJL_1629 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apj01011
]
APJL_1629 (dacA)
Enzymes [BR:
apj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
APJL_1629 (dacA)
Peptidases and inhibitors [BR:
apj01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
APJL_1629 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
apj01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
APJL_1629 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
DUF5839
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ABY70181
UniProt:
B0BRS2
LinkDB
All DBs
Position
complement(1785627..1786805)
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AA seq
392 aa
AA seq
DB search
MKRTLLKSVSLCALAVSQFATADANVDFGISAPQLNAQTYILMDYNSGNVLASLNPDQRQ
YPASLTKMMTSYVVGDALKQGKVKNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVADLM
RGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKFGQQFGLKNTNFTTVHGLDDPNQYSSAR
DMAIIGVHVIRDQPEEYKIYAEKEFKYNIKKAQPNRNGLLWDKTINVDGMKTGHTSQAGY
NLVASATNNNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLQAGQAVSEQSVYY
GEADKVQLGSIQDSFVTVPKGKASELKARYELERKNLEAPLAKGQVIGKVIYQLDGKDVA
SSDLQVLQDVPEAGIFGKAWDWVVLTVKSLFD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacgttattaaaatccgtaagcctttgcgctttagccgtttctcaatttgcg
accgcagacgcaaatgtggatttcggtatttccgcaccgcaattaaatgcacagacctat
attttaatggactataattcgggtaatgtattggcaagtttaaatccggatcaacgtcaa
tatccggcatcattgaccaaaatgatgaccagttatgtagtgggggacgcccttaaacaa
ggtaaagtaaaaaacagcgatatggtgaccgttaccgagaattcttgggcgcaaaaattc
ccgggatcatcattaatgttcttggatttaaacacgcaagtttcggttgccgatttaatg
cgcggtttaattatcgtatcgggtaatgatgcggcggtggcgttggcggaacatacttcc
ggctcgcaacaagcctttatcgaccaaatgaacaagttcggtcagcaattcggtttgaaa
aataccaattttacgaccgtacacggtttggatgatccgaatcaatattcatctgcacgc
gatatggcgattatcggtgtgcatgttattcgtgatcagccggaagaatataaaatttat
gccgaaaaagaatttaaatacaacattaaaaaagcacagccgaaccgtaacggtttgctt
tgggataaaacgattaatgtggacggtatgaaaacaggtcacaccagtcaagccggttat
aatttagtcgcatccgcaacgaataacaacacccgtttaatttcggtggtaatgggcgta
ccgacgtataaaggccgtgaagtcgaaagtaaaaaactcctgcaatggggttttgcaaac
tttgaaacggtaaaatcgttacaagcgggacaagcggtttccgaacagagcgtttactac
ggcgaagcggataaagtccaactcggttcaattcaagacagctttgtgaccgtaccgaaa
ggtaaggcgtccgaattaaaagctcgttacgagttggaacgtaaaaaccttgaagcgcct
ttagcgaaaggtcaggttatcggtaaagtgatttaccaattggacggtaaagatgttgca
agtagcgatctgcaagtgttacaagacgtacctgaagcgggtattttcggtaaagcatgg
gattgggtggtattaaccgttaagagtttatttgactaa
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