Anas platyrhynchos (mallard): 101790658
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Entry
101790658 CDS
T02816
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101790658 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101790658 (CDC40)
Spliceosome [BR:
apla03041
]
Complex C
Other components
Step II factors
101790658 (CDC40)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PQQ_2
Motif
Other DBs
NCBI-GeneID:
101790658
NCBI-ProteinID:
XP_027310517
Ensembl:
ENSAPLG00000013973
EnsemblRapid:
ENSAPLG00030003111
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Position
3:complement(71117593..71153131)
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AA seq
580 aa
AA seq
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MSAAIAALASYGGSDSEPDSEPEAEADPRPAAVLASRDAVLHLRPPPAAPPALPVDSAPE
VAVKEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAH
INDFMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQKKIEKRK
KFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKVEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPL
SGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLW
DTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRVKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggctatcgccgcgctcgcctcctacggcggctccgactcggagccggactcg
gagcccgaagccgaggccgacccccggcccgccgccgtgctggccagccgcgacgccgtg
ctgcacctccgcccgccccccgccgcgcccccggcgctgcccgtcgactcggccccggaa
gtggccgtgaaggaagatgtggaaacaggagtccacctcgatcctgctatcaaggaagtc
cagtacaatcccacttacgagaccatgtttgcacccgagtttggaccagaaaacccattt
aggactcagcagatggctgcacctagaaatatgctttctggatatgcagaaccagctcac
atcaatgatttcatgtttgagcaacaaagaagaacgtttgtaacctatggttatgcatta
gatccctctatagataaccctgaagttgctaccaagtatattggttctgtggaagaagct
gaaaaaaatcaaggtttaacagtgtttgaaacaggacaaaagaaaattgaaaaaaggaag
aaattcaaggagaacgatgcatctaacattgatggttttctgggaccatgggcaaagtat
gttgatgaaaaagaagtagccaagccatcagaagaagagcagaaagagttggatgaaata
acagctaagaggcagaagagaggaaaggtggaagatgataaacctggagaggagaagact
atattacatgttaaggaaatgtatgactaccaggggagatcttaccttcacgttcctcaa
gatgttggagttaatctccgttctacagtgccgcctgagaagtgctatcttccaaagaaa
caaatccatgtatggtctggacatacaaagggtgtcagtgcagttcggttgtttcctctg
tctggccatatgctgttgtcctgctctatggattgcaaaattaagctatgggaagtatat
ggtgatcgaagatgtctacgaacatttattggacatggtaaagctgttcgagacatctgt
tttaataacgctggcactcggtttcttagtgctgcatatgaccgctatattaaactctgg
gacactgaaacaggacaatgcatttcaagattcacaaacaggaaggttccttattgtgtc
aagttcaatcctgatgaagataaacaaaacctctttgttgcaggaatgtcagacaagaaa
attgtgcagtgggatattcggagtggtgagattgtgcaggagtatgataggcatttggga
gctgtcaacaccattgtatttgtggatgaaaatagaaggtttgtgagtacatctgatgac
aagagcttaagagtctgggaatgggacattcctgtagacttcaagtacattgctgagcca
agtatgcattcgatgccagccgtgactttgtctccaaatgggaaatggttggcttgccag
tcaatggataaccaaattctgatttttggagctcagaacagattcagattaaacaaaaag
aaaatcttcaaaggtcacatggtagctggctacgcttgtcaagtggatttttcacctgat
atgagctatgtgatatctggagatgcagatggaaaactgaacatctgggactggaagaca
acaaaactctacagcagagtaaaagcacacgataaagtctgtattggtgcagtctggcat
ccacacgaaacatccaaagtcattacgtgcggctgggatggtcttattaaactctgggac
taa
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